RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Chrm1P12657 460 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Irx6Q9ER75 438 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Ifit1bl1D3Z6F0 470 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Kdm2aP59997 1161 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Kif16bB1AVY7 1312 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Fhod3Q76LL6 1578 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Rundc1Q0VDN7 615 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Rsph3aQ3UFY4 516 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Nxf2Q4ZGD8 691 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Frmd3Q8BHD4 595 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 GorabQ8BRM2 368 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Rcan3Q9JKK0 239 aa10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Clasp1Q80TV8 1535 aaKnown RBP10.95□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Kidins220E9Q9B7 1793 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Pdcd11Q6NS46 1862 aaKnown RBP10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Ppp2r3aB2RXC8 1150 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Trim30aP15533 496 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Card11Q8CIS0 1159 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Pik3c2gO70167 1506 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Neurl4Q5NCX5 1563 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Pwp2Q8BU03 919 aaKnown RBP10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Hecw1Q8K4P8 1604 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 PtprgQ05909 1442 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Tbc1d32Q3URV1 1296 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Gripap1Q8VD04 806 aa10.94□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Syce3B5KM66 88 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Ica1lQ3TY65 431 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Sh3bp5Q9Z131 463 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Cdc42bpbQ7TT50 1713 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Abca9Q8K449 1623 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Ttc21bQ0HA38 1315 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Sass6Q80UK7 654 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Ncbp3Q8BZR9 615 aaKnown RBP10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Atp1b4Q99ME6 356 aa10.93□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Atp7aQ64430 1491 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Lcmt1A0A0U1RNF2 332 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Map7d2A2AG50 781 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Skap1Q3UUV5 355 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Bloc1s4Q8VED2 215 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Nos1Q9Z0J4 1429 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Kif3aP28741 701 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Ncbp1Q3UYV9 790 aaKnown RBP10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Afap1Q80YS6 731 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Znf518aB2RRF6 1478 aaKnown RBP10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Plekhg5Q66T02 1073 aa10.92□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Ylpm1Q9R0I7 1386 aaKnown RBP10.91□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Cwc22Q8C5N3 908 aaKnown RBP10.91□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Kif2cQ922S8 721 aa10.91□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Mctp2Q5RJH2 878 aa10.91□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Nol7Q9D7Z3 254 aaKnown RBP10.91□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Synj2Q9D2G5 1434 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 4931400O07RikQ9D4M5 137 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Atp2b2Q9R0K7 1198 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 AglF8VPN4 1532 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Tmed8Q3UHI4 326 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Igsf3Q6ZQA6 1194 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Chd1lQ9CXF7 900 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 ErbinQ80TH2 1402 aa10.9□□□□□ -0.66
Prpf40a-208ENSMUST00000210789 Trpm2Q91YD4 1506 aa10.9□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 DroshaQ5HZJ0 1373 aaKnown RBP10.9□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Usp54Q8BL06 1588 aaKnown RBP10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Dnajc5P60904 198 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Tomm22Q9CPQ3 142 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Gli2Q0VGT2 1544 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Gm9992B2RWK3 458 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 NmiO35309 314 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Unc93aQ710D3 458 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Bag4Q8CI61 457 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Lamc1P02468 1607 aaKnown RBP10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Atp10aO54827 1508 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Gm20521D3Z5F7 333 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Srpk2O54781 681 aaKnown RBP10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Swt1Q9DBQ9 907 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Irx5Q9JKQ4 484 aa10.89□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Tfip11Q9ERA6 838 aaKnown RBP10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Yeats2Q3TUF7 1407 aa10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Dapk1Q80YE7 1442 aa10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Naip6Q9JIB6 1403 aa10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Rasa1E9PYG6 1038 aa10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Tnnt1O88346 262 aa10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Slc7a3P70423 618 aa10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Gas2l2Q5SSG4 860 aa10.88□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Ppm1eQ80TL0 749 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Supt6hQ62383 1726 aaKnown RBP10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Aplp1Q03157 653 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Prdm10Q3UTQ7 1184 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Olfml1Q8BSH2 233 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Sall3Q62255 1320 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Rock2P70336 1388 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Duxf3A0A0N4SV92 674 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Atp2b1G5E829 1220 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Tmco5bQ80X59 307 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 4930548H24RikQ9D496 437 aa10.87□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Card6E9PWH2 1175 aa10.86□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Rock1P70335 1354 aa10.86□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Kif1bQ60575 1816 aaKnown RBP10.86□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Inpp5bQ8K337 993 aa10.85□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Ttc37F8VPK0 1563 aa10.85□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Map7O88735 730 aa10.84□□□□□ -0.67
Prpf40a-208ENSMUST00000210789 Plekhh1Q80TI1 1356 aa10.84□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 38.1 ms