RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 Crybg2B7ZCC2 1516 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Tmc1Q8R4P5 757 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Pip4k2aO70172 405 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 PdcQ9QW08 244 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Atp2b2Q9R0K7 1198 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Gimap6Q8K349 305 aa14.88□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Gnai2P08752 355 aaKnown RBP14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Q9D9H8 365 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Slc13a4Q8BZ82 625 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 SkilQ60665 675 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 ArsiQ32KI9 573 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Nek4Q9Z1J2 792 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Plekhh1Q80TI1 1356 aa14.87□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Sugp2Q8CH09 1067 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Pank1Q8K4K6 548 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Zkscan2G3X952 960 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Dennd6aQ8BH65 605 aa14.86□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Themis2Q91YX0 663 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Speer4bQ9D9F7 267 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 PsapQ61207 557 aaKnown RBP14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Nol7Q9D7Z3 254 aaKnown RBP14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Mcm2P97310 904 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Trim34aQ99PP6 485 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Ripk4Q9ERK0 786 aa14.85□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Lrrfip2Q91WK0 415 aa14.84□□□□□ -0.03
Col6a3-208ENSMUST00000188587 IbspQ61711 324 aa14.84□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Washc2Q6PGL7 1334 aa14.84□□□□□ -0.03
Col6a3-208ENSMUST00000188587 NefhP19246 1090 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Kif20aP97329 887 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Pde4bB1AWC9 736 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Gtf3c3Q3TMP1 882 aa14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Nol8Q3UHX0 1147 aaKnown RBP14.83□□□□□ -0.03
Col6a3-208ENSMUST00000188587 Ccdc141E9Q8Q6 1531 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cyp26c1B2RXA7 518 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cdkn1cP49919 348 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Fkbp4P30416 458 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 MpripP97434 1024 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Atad2bE9Q166 1460 aaKnown RBP14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Nolc1E9Q5C9 702 aaKnown RBP14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Wdhd1P59328 1117 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Egfem1Q8C088 590 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Znf710Q3U288 666 aa14.83□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Stk38Q91VJ4 465 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ankrd36D3Z4K0 1415 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Flad1Q8R123 492 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm21663A0A0G2JE01 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm7361D3Z6R1 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 5031410I06RikE9Q4E0 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm1979E9QAN3 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm5862K7N5V5 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm10220K7N660 267 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ppm1eQ80TL0 749 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ssr1Q9CY50 286 aaKnown RBP14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ttc19Q8CC21 365 aa14.82□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Jph4Q80WT0 628 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ercc6lQ8BHK9 1240 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Tango6Q8C3S2 1079 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Puf60Q3UEB3 564 aaKnown RBP14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cavin4A2AMM0 362 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Prpf4bQ61136 1007 aaKnown RBP14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Golim4Q8BXA1 655 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cecr2E9Q2Z1 1453 aa14.81□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Hs1bp3Q3TC93 395 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Rapgef4Q9EQZ6 1011 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Abcd1P48410 736 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 TkfcQ8VC30 578 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Larp1Q6ZQ58 1072 aaKnown RBP14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 GlmnQ8BZM1 596 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Dhx8A2A4P0 1244 aaKnown RBP14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gsdma2Q32M21 443 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Tmco3Q8BH01 678 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Q9D9S1 216 aa14.8□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cep131Q62036 1060 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Tubb6Q922F4 447 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Zscan20B2KFW1 1030 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Cdkl5Q3UTQ8 938 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Bag1Q60739 355 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Rnf214Q8BFU3 668 aaKnown RBP14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 ZgpatQ8VDM1 511 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Zeb2Q9R0G7 1215 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Rpgrip1lQ8CG73 1264 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Krt84Q99M73 603 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Arhgef18Q6P9R4 1021 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Galntl5Q9D4M9 431 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Vps37dQ810I0 261 aa14.79□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Hmgb2P30681 210 aaKnown RBP14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Babam1Q3UI43 333 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Nup133Q8R0G9 1155 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Gm21680A0A0G2JGR8 267 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Phldb2Q8K1N2 1249 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Ccdc178Q8CDV0 866 aa14.78□□□□□ -0.04
Col6a3-208ENSMUST00000188587 Mipol1Q9D9F8 279 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Btbd11Q6GQW0 1109 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Cfap69Q8BH53 942 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Riok1Q922Q2 567 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Rhot2Q8JZN7 620 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Nphp1Q9QY53 687 aa14.77□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Ccar2Q8VDP4 922 aaKnown RBP14.76□□□□□ -0.05
Col6a3-208ENSMUST00000188587 TnmdQ9EP64 317 aa14.76□□□□□ -0.05
Col6a3-208ENSMUST00000188587 Srgap3Q812A2 1099 aa14.76□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms