RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 Mctp1E9PV86 951 aa12.21□□□□□ -0.46
Lig4-201ENSMUST00000095476 NmiO35309 314 aa12.21□□□□□ -0.46
Lig4-201ENSMUST00000095476 Psma5Q9Z2U1 241 aaKnown RBP12.21□□□□□ -0.46
Lig4-201ENSMUST00000095476 Zfp644E9QA22 1323 aa12.21□□□□□ -0.46
Lig4-201ENSMUST00000095476 Nucb2P81117 420 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Evc2Q8K1G2 1220 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Gm42641I6L9G2 585 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Cplx1P63040 134 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Cnnm3Q32NY4 713 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Bag1Q60739 355 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 AtripQ8BMG1 785 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Adcy5P84309 1262 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Serpina10Q8R121 448 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Fam114a1Q9D281 569 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Phlpp2Q8BXA7 1320 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Cep112Q5PR68 954 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Safb2Q80YR5 991 aaKnown RBP12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 MicalclQ9D5U9 680 aa12.2□□□□□ -0.46
Lig4-201ENSMUST00000095476 Rasa1E9PYG6 1038 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Jakmip2D3YXK0 820 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Dync1i1O88485 628 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Kiaa0753Q6A000 959 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Chmp3Q9CQ10 224 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Myom3A2ABU4 1439 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Fam135aQ6NS59 1506 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 BbxQ8VBW5 907 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Il4rP16382 810 aa12.19□□□□□ -0.46
Lig4-201ENSMUST00000095476 Gm21969J3QJZ1 289 aa12.18□□□□□ -0.46
Lig4-201ENSMUST00000095476 Zfp91Q62511 572 aa12.18□□□□□ -0.46
Lig4-201ENSMUST00000095476 Cfap99A0A140LIX9 648 aa12.18□□□□□ -0.46
Lig4-201ENSMUST00000095476 Grpel1Q99LP6 217 aa12.18□□□□□ -0.46
Lig4-201ENSMUST00000095476 PhaxQ9JJT9 385 aaKnown RBP12.18□□□□□ -0.46
Lig4-201ENSMUST00000095476 Q9D9S1 216 aa12.18□□□□□ -0.46
Lig4-201ENSMUST00000095476 Slu7Q8BHJ9 585 aa12.18□□□□□ -0.46
Lig4-201ENSMUST00000095476 Catsper2A2ARP9 588 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Wwc1Q5SXA9 1104 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Krt85Q9Z2T6 507 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 FosbP13346 338 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 CarsQ9ER72 831 aaKnown RBP12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Dnajc2P54103 621 aaKnown RBP12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Ppm1eQ80TL0 749 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Rsph6aQ8CDR2 708 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Paf1Q8K2T8 535 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 ItpripQ3TNL8 555 aa12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Wdr33Q8K4P0 1330 aaKnown RBP12.17□□□□□ -0.46
Lig4-201ENSMUST00000095476 Cavin4A2AMM0 362 aa12.16□□□□□ -0.46
Lig4-201ENSMUST00000095476 Tiam1Q60610 1591 aa12.16□□□□□ -0.46
Lig4-201ENSMUST00000095476 Kif2aP28740 705 aa12.16□□□□□ -0.46
Lig4-201ENSMUST00000095476 Nol10Q5RJG1 687 aaKnown RBP12.16□□□□□ -0.46
Lig4-201ENSMUST00000095476 Zfp251Q6PCX8 632 aa12.16□□□□□ -0.46
Lig4-201ENSMUST00000095476 Serpinb6bO08804 377 aa12.16□□□□□ -0.46
Lig4-201ENSMUST00000095476 Apaf1O88879 1249 aa12.15□□□□□ -0.46
Lig4-201ENSMUST00000095476 Jakmip1Q8BVL9 626 aa12.15□□□□□ -0.46
Lig4-201ENSMUST00000095476 TchhA0A0B4J1F9 1599 aa12.15□□□□□ -0.46
Lig4-201ENSMUST00000095476 Rbm27Q5SFM8 1060 aaKnown RBP12.15□□□□□ -0.46
Lig4-201ENSMUST00000095476 Atp2b2Q9R0K7 1198 aa12.15□□□□□ -0.46
Lig4-201ENSMUST00000095476 Cfap58B2RW38 873 aa12.15□□□□□ -0.47
Lig4-201ENSMUST00000095476 Rab11fip3Q8CHD8 1047 aa12.15□□□□□ -0.47
Lig4-201ENSMUST00000095476 Sart1Q9Z315 806 aaKnown RBP12.15□□□□□ -0.47
Lig4-201ENSMUST00000095476 Dnai2A2AC93 623 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Nom1Q3UFM5 854 aaKnown RBP12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Gzf1Q4VBD9 706 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Trim30cD3YVI9 513 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Zkscan7E9PVW1 718 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Cpa2Q504N0 417 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Mmel1Q9JLI3 765 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Naip5Q9R016 1403 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Uri1Q3TLD5 531 aa12.14□□□□□ -0.47
Lig4-201ENSMUST00000095476 Kif3bQ61771 747 aa12.13□□□□□ -0.47
Lig4-201ENSMUST00000095476 Phldb2Q8K1N2 1249 aa12.13□□□□□ -0.47
Lig4-201ENSMUST00000095476 Plb1Q3TTY0 1478 aa12.13□□□□□ -0.47
Lig4-201ENSMUST00000095476 Mcm3P25206 812 aaKnown RBP12.13□□□□□ -0.47
Lig4-201ENSMUST00000095476 Cers3Q1A3B0 383 aa12.13□□□□□ -0.47
Lig4-201ENSMUST00000095476 Tubb6Q922F4 447 aa12.13□□□□□ -0.47
Lig4-201ENSMUST00000095476 Odf2A3KGV1 830 aaKnown RBP12.13□□□□□ -0.47
Lig4-201ENSMUST00000095476 Cep135Q6P5D4 1140 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 Maco1Q7TQE6 664 aaKnown RBP12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 CenpqQ9CPQ5 267 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 Hoxa7P02830 229 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 Ctr9Q62018 1173 aaKnown RBP12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 Maats1Q8BRC6 783 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 Stk3Q9JI10 497 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 Camsap2Q8C1B1 1461 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 PrxO55103 1391 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 LarsQ8BMJ2 1178 aa12.12□□□□□ -0.47
Lig4-201ENSMUST00000095476 Smc1bQ920F6 1248 aa12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 Ppp6r1Q7TSI3 856 aa12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 Stk38Q91VJ4 465 aa12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 MvpQ9EQK5 861 aa12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 Nphp1Q9QY53 687 aa12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 Trim25Q61510 634 aaKnown RBP12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 Cep57l1Q8VDS7 400 aa12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 MlecQ6ZQI3 291 aaKnown RBP12.11□□□□□ -0.47
Lig4-201ENSMUST00000095476 Znf526Q8BI66 675 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 SelenooQ9DBC0 667 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Shroom4Q1W617 1475 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Dhx16G3X8X0 1044 aaKnown RBP12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Lamb3Q61087 1168 aa12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Eif3aP23116 1344 aaKnown RBP12.1□□□□□ -0.47
Lig4-201ENSMUST00000095476 Ddx19aQ61655 478 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms