RNA–Protein interactions for RNA: ENSMUST00000094287.9

Ctcfl-201, Transcript of Transcriptional repressor CTCFL, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ctcfl, Length 3,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcfl-201ENSMUST00000094287 Atp2b2Q9R0K7 1198 aa13.16□□□□□ -0.3
Ctcfl-201ENSMUST00000094287 Ppp2r3aB2RXC8 1150 aa13.16□□□□□ -0.3
Ctcfl-201ENSMUST00000094287 Zbtb38Q3LR78 1197 aa13.16□□□□□ -0.3
Ctcfl-201ENSMUST00000094287 Maco1Q7TQE6 664 aaKnown RBP13.16□□□□□ -0.3
Ctcfl-201ENSMUST00000094287 Cfap74Q3UY96 1578 aa13.16□□□□□ -0.3
Ctcfl-201ENSMUST00000094287 Kif1bQ60575 1816 aaKnown RBP13.16□□□□□ -0.3
Ctcfl-201ENSMUST00000094287 Ptch1Q61115 1434 aa13.16□□□□□ -0.3
Ctcfl-201ENSMUST00000094287 Mcm10Q0VBD2 885 aa13.15□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 IbtkQ6ZPR6 1352 aaKnown RBP13.14□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Map4k4P97820 1233 aaKnown RBP13.14□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Q4VA45 678 aa13.14□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Rnf17Q99MV7 1640 aa13.13□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 ShprhQ7TPQ3 1674 aa13.13□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 G3bp1P97855 465 aaKnown RBP13.13□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Pdlim2Q8R1G6 349 aa13.13□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Cog6Q8R3I3 657 aa13.13□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Afap1Q80YS6 731 aa13.13□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 PalmQ9Z0P4 383 aa13.13□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Setd1aE9PYH6 1716 aa13.12□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Abcc3B2RX12 1523 aa13.12□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Slc12a5Q91V14 1138 aa13.12□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Asxl2Q8BZ32 1370 aa13.12□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Cdk19Q8BWD8 501 aa13.12□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Tubgcp6G5E8P0 1769 aa13.11□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Tnnt2P50752 301 aa13.11□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Styxl1Q9DAR2 321 aa13.11□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Igf1rQ60751 1373 aa13.11□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Gsto1O09131 240 aa13.1□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Dhx30Q99PU8 1217 aaKnown RBP13.1□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Ccdc146E9Q9F7 977 aa13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Sptbn5F6UCX4 1208 aa13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Ssh1Q76I79 1042 aa13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Klhdc4Q921I2 584 aa13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Nphp4P59240 1425 aa13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Ttc41Q692V3 1318 aa13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Scaf11E9PZM7 1456 aaKnown RBP13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Robo2Q7TPD3 1470 aa13.09□□□□□ -0.31
Ctcfl-201ENSMUST00000094287 Dnajc5gQ8C632 165 aa13.08□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Kif18aQ91WD7 886 aa13.08□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Cc2d1aQ8K1A6 943 aa13.08□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Dmrt2Q8BG36 561 aa13.07□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Chmp4cQ9D7F7 232 aa13.07□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Cabp2Q9JLK4 216 aa13.07□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 CastP51125 788 aa13.07□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Phf14Q9D4H9 881 aa13.07□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Trim44Q9QXA7 346 aa13.07□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 NinlQ6ZQ12 1394 aa13.07□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 NhsB1AV60 1647 aa13.06□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Abca6Q8K441 1624 aa13.06□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Catsper2A2ARP9 588 aa13.06□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Rabep1O35551 862 aa13.06□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Sox12Q04890 314 aa13.06□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Kidins220E9Q9B7 1793 aa13.06□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Pola1P33609 1465 aa13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Cavin4A2AMM0 362 aa13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Mcm4P49717 862 aa13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Zcwpw1Q6IR42 630 aa13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Cfap65Q3V0B4 1847 aa13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Irf5P56477 497 aa13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Tfip11Q9ERA6 838 aaKnown RBP13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Usp16Q99LG0 825 aa13.05□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Kdm5aQ3UXZ9 1690 aa13.04□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Txndc2Q6P902 515 aa13.04□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Tmem132aQ922P8 1018 aa13.04□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Nos1Q9Z0J4 1429 aa13.04□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Dmrtc1Q9D9R7 182 aa13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Map7O88735 730 aa13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Swt1Q9DBQ9 907 aa13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 OvosQ3UU35 1456 aa13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Lrrc7Q80TE7 1490 aa13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 MpripP97434 1024 aa13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Nom1Q3UFM5 854 aaKnown RBP13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Q3UPC7 1272 aa13.03□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Triml2E9PW10 424 aa13.02□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 PogkQ80TC5 607 aa13.02□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Plekhm2Q80TQ5 1018 aa13.02□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Abca8bQ8K440 1620 aa13.02□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Xrn1P97789 1719 aaKnown RBP13.02□□□□□ -0.32
Ctcfl-201ENSMUST00000094287 Depdc5P61460 1591 aa13.02□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Nek4Q9Z1J2 792 aa13.02□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Znf521Q6KAS7 1311 aa13.02□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 AnkarA2RT91 1465 aa13.02□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Tex2Q6ZPJ0 1128 aaKnown RBP13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Nsfl1cQ9CZ44 370 aaKnown RBP13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Psme1P97371 249 aa13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Safb2Q80YR5 991 aaKnown RBP13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Cdc37l1Q9CZP7 335 aa13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Gprasp1Q5U4C1 1347 aa13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Znf518aB2RRF6 1478 aaKnown RBP13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 SkilQ60665 675 aa13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Yeats2Q3TUF7 1407 aa13.01□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 BbxQ8VBW5 907 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Gli2Q0VGT2 1544 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 PalldQ9ET54 1408 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Sh3bp1P55194 680 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Atl3Q91YH5 541 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Antxr1Q9CZ52 562 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Erich6bQ9D4S6 220 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Slc52a2Q9D8F3 450 aa13□□□□□ -0.33
Ctcfl-201ENSMUST00000094287 Tnnt1O88346 262 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms