RNA–Protein interactions for RNA: ENSMUST00000088171.10

Rtn3-204, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 4,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-204ENSMUST00000088171 Gtf2f1Q3THK3 508 aaKnown RBP12.62□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Fkbp4P30416 458 aa12.62□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Jmjd4Q8BFT6 427 aa12.62□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Cchcr1Q8K2I2 770 aa12.62□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Atp10dQ8K2X1 1416 aa12.61□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Lrrc45Q8CIM1 670 aa12.61□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Tmod2Q9JKK7 351 aa12.61□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Pdcl3Q8BVF2 240 aa12.61□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Nlrp3Q8R4B8 1033 aa12.61□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Usp47Q8BY87 1376 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Gtpbp6Q3U6U5 514 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Vps37dQ810I0 261 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Kcnh5Q920E3 988 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Ylpm1Q9R0I7 1386 aaKnown RBP12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Cfap69Q8BH53 942 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Psma5Q9Z2U1 241 aaKnown RBP12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Slc4a3P16283 1227 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Zscan10Q3URR7 782 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Gpatch3Q8BIY1 525 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 SynmQ70IV5 1561 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Pde3aQ9Z0X4 1141 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Caskin1Q6P9K8 1431 aa12.6□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Ankrd13dQ6PD24 605 aa12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Ttc19Q8CC21 365 aa12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Kiaa0754Q69ZZ9 979 aa12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Fnbp4Q6ZQ03 1031 aa12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Dnttip2Q8R2M2 758 aaKnown RBP12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Smc3Q9CW03 1217 aaKnown RBP12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 HnrnpmQ9D0E1 729 aaKnown RBP12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Thoc2B1AZI6 1594 aaKnown RBP12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Ripply1Q2WG77 201 aa12.59□□□□□ -0.39
Rtn3-204ENSMUST00000088171 Slc52a2Q9D8F3 450 aa12.58□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Znf704Q9ERQ3 566 aa12.58□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Pde4dQ01063 747 aa12.58□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Rsph3aQ3UFY4 516 aa12.58□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Q9D2X8 372 aa12.58□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Stxbp4Q9WV89 557 aa12.58□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Nap1l1P28656 391 aaKnown RBP12.57□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Trim30aP15533 496 aa12.57□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Fam193aQ8CGI1 1231 aaKnown RBP12.57□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Map3k5O35099 1380 aa12.57□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Hdgfl1Q2VPR5 283 aa12.57□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Magi1Q6RHR9 1471 aa12.57□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Kif3cO35066 796 aa12.56□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Rbm26Q6NZN0 1012 aaKnown RBP12.56□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Noc2lQ9WV70 747 aaKnown RBP12.56□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Exoc5Q3TPX4 708 aa12.56□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Frat2Q8K025 231 aa12.56□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Pip4k2aO70172 405 aa12.55□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Rapgef2Q8CHG7 1496 aa12.55□□□□□ -0.4
Rtn3-204ENSMUST00000088171 EappQ5BU09 281 aa12.55□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Ercc6lQ8BHK9 1240 aa12.55□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Mroh2bQ7M6Y6 1581 aa12.55□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Mlh3A0A1Y7VMP7 1443 aa12.55□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Rbm25B2RY56 838 aaKnown RBP12.55□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Dennd4bQ3U1Y4 1499 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Phactr2B1AVP0 632 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Trim58Q5NCC9 485 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Taok2Q6ZQ29 1240 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Hmox1P14901 289 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Kiaa1211Q5PR69 1207 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Epb41l3Q9WV92 929 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 MpripP97434 1024 aa12.54□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Gcom1E9PZ54 550 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 MyzapQ3UIJ9 466 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Acsbg1Q99PU5 721 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Gsdma2Q32M21 443 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Ccdc178Q8CDV0 866 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Casq1O09165 405 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 GnpatP98192 678 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Nol8Q3UHX0 1147 aaKnown RBP12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Bms1Q6PGF5 1284 aaKnown RBP12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Drc7Q6V3W6 876 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Gpatch11Q3UFS4 262 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Olr1Q9EQ09 363 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Abcc1O35379 1528 aa12.53□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Cers3Q1A3B0 383 aa12.52□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Ankib1Q6ZPS6 1085 aa12.52□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Krt84Q99M73 603 aa12.52□□□□□ -0.4
Rtn3-204ENSMUST00000088171 Pbrm1Q8BSQ9 1634 aaKnown RBP12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Ccdc34Q3UI66 367 aa12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Polr3dQ91WD1 398 aa12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Erc1Q99MI1 1120 aa12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Camsap2Q8C1B1 1461 aa12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Ncapd3Q6ZQK0 1506 aa12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Myo1bP46735 1107 aa12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Kif20aP97329 887 aa12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Zrsr2Q62377 462 aaKnown RBP12.52□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Rnf216P58283 853 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Galntl5Q9D4M9 431 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Prr29B1ARI9 187 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Strn4P58404 760 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Zcwpw1Q6IR42 630 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Lrrfip2Q91WK0 415 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Fam50bQ9WTJ8 334 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Fancd2Q80V62 1450 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Rufy1Q8BIJ7 712 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Hnrnpul1Q8VDM6 859 aaKnown RBP12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 Nap1l5Q9JJF0 156 aa12.51□□□□□ -0.41
Rtn3-204ENSMUST00000088171 FosbP13346 338 aa12.51□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms