RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Myom2Q14BI5 1463 aa11.86□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Asxl1P59598 1514 aa11.86□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Kif4P33174 1231 aa11.86□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Tarbp1E9Q368 1579 aa11.86□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 ErmnQ5EBJ4 281 aa11.85□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Tbc1d30Q69ZT9 766 aa11.85□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Rnf214Q8BFU3 668 aaKnown RBP11.85□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 SrrtQ99MR6 875 aaKnown RBP11.85□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Dmrtc1Q9D9R7 182 aa11.85□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Sh3bp5Q9Z131 463 aa11.85□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Znf608Q56A10 1511 aa11.84□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Rgl3Q3UYI5 709 aa11.84□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Zkscan1Q8BGS3 561 aaKnown RBP11.84□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Fam184aE9PW83 1143 aa11.84□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Gtf3c6Q9D8P7 227 aa11.84□□□□□ -0.51
Hmgb1-201ENSMUST00000085546 Rassf4Q8CB96 322 aa11.83□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 MvpQ9EQK5 861 aa11.83□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Arhgef40Q3UPH7 1517 aa11.83□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Grin2aP35436 1464 aa11.83□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Iqgap1Q9JKF1 1657 aaKnown RBP11.83□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Ms4a1P19437 291 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Ercc3P49135 783 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Gabpb2P81069 414 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Mx2Q9WVP9 655 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Rab3gap2Q8BMG7 1366 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Zfp397Q7TNK4 527 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 1700010I14RikQ7TPG0 532 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 CenpqQ9CPQ5 267 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Vps33aQ9D2N9 598 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 MycbpQ9EQS3 103 aa11.82□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 PrxO55103 1391 aa11.81□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Olfml1Q8BSH2 233 aa11.81□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Kif18aQ91WD7 886 aa11.81□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Polr3aB2RXC6 1390 aa11.81□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Zfp644E9QA22 1323 aa11.81□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Dhx9O70133 1380 aaKnown RBP11.81□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Trpm1Q2TV84 1622 aa11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Tpm3P21107 285 aaKnown RBP11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 KnstrnQ9D9Z1 312 aaKnown RBP11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Zkscan4Q5SZT6 480 aa11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Ralbp1Q62172 648 aa11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Atad2bE9Q166 1460 aaKnown RBP11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Rad54l2Q99NG0 1466 aa11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Elp1Q7TT37 1333 aaKnown RBP11.8□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Plekhh2Q8C115 1491 aa11.79□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Oas2E9Q9A9 742 aa11.79□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Ppp2r1aQ76MZ3 589 aa11.79□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Ppp1r18Q8BQ30 594 aa11.79□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Rai14Q9EP71 979 aaKnown RBP11.79□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Klra1P20937 262 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Zscan10Q3URR7 782 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Nol10Q5RJG1 687 aaKnown RBP11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Samd9lQ69Z37 1561 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Wdr7Q920I9 1489 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Adcy5P84309 1262 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Spata32Q8C5V0 334 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Tbc1d8Q9Z1A9 1134 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Tbc1d4Q8BYJ6 1307 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Fam53cQ8BXQ8 393 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Irx6Q9ER75 438 aa11.78□□□□□ -0.52
Hmgb1-201ENSMUST00000085546 Cog6Q8R3I3 657 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Creld2Q9CYA0 350 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Lcmt1A0A0U1RNF2 332 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Card6E9PWH2 1175 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 RdxP26043 583 aaKnown RBP11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Gpatch11Q3UFS4 262 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Dmrt2Q8BG36 561 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Syt10Q9R0N4 523 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Setd1bQ8CFT2 1985 aa11.77□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Neurod2Q62414 383 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Oxsr1Q6P9R2 527 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Kcnf1Q7TSH7 493 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Zkscan3Q91VW9 553 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Tfip11Q9ERA6 838 aaKnown RBP11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 AlkP97793 1621 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 KdrP35918 1367 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Sbno1Q689Z5 1390 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Kcng1A2BDX4 514 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Serpinb6bO08804 377 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Zbtb38Q3LR78 1197 aa11.76□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Kmt5bQ3U8K7 883 aa11.75□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Anapc4Q91W96 807 aa11.75□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Inpp5dQ9ES52 1191 aa11.75□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Sf3a1Q8K4Z5 791 aaKnown RBP11.75□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Golga5Q9QYE6 729 aa11.75□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Cgref1Q8R1U2 281 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 SetQ9EQU5 289 aaKnown RBP11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 EcsitQ9QZH6 435 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Nphp4P59240 1425 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Zscan29E9Q5B4 869 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Rtel1Q0VGM9 1203 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 EngaseQ8BX80 734 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Cep83Q9D5R3 692 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Zeb2Q9R0G7 1215 aa11.74□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Brd1E9PZ26 1189 aaKnown RBP11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Tpd52l1O54818 204 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Zdhhc9P59268 364 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Klra4Q60651 263 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Myo1cQ9WTI7 1063 aa11.73□□□□□ -0.53
Hmgb1-201ENSMUST00000085546 Cluap1Q8R3P7 413 aa11.73□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 29.7 ms