RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 TxlnaQ6PAM1 554 aaKnown RBP14.68□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cc2d2bA0A286YDU8 1405 aa14.68□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Lrrfip1Q3UZ39 729 aaKnown RBP14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Ccar2Q8VDP4 922 aaKnown RBP14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Krt85Q9Z2T6 507 aa14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cfdp1O88271 295 aaKnown RBP14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Ccdc102aQ3TMW1 549 aa14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Rhot2Q8JZN7 620 aa14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Hdgfl1Q2VPR5 283 aa14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Abcd1P48410 736 aa14.67□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Slc13a4Q8BZ82 625 aa14.66□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Tnpo1Q8BFY9 898 aaKnown RBP14.66□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 ItpripQ3TNL8 555 aa14.66□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 NcapgE9PWG6 1004 aa14.66□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Gnai2P08752 355 aaKnown RBP14.66□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Ehmt1Q5DW34 1296 aa14.66□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cyp26c1B2RXA7 518 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Tango6Q8C3S2 1079 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cfap58B2RW38 873 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 CastP51125 788 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Pmfbp1Q9WVQ0 1022 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cavin4A2AMM0 362 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Cfap45Q9D9U9 551 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Mink1Q9JM52 1308 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Fyb1O35601 819 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Ccdc181Q80ZU5 509 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Ttll5Q8CHB8 1328 aa14.65□□□□□ -0.06
Vcpip1-201ENSMUST00000057438 Shq1Q7TMX5 569 aa14.64□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Lmbr1Q9JIT0 490 aa14.64□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Agtpbp1Q641K1 1218 aa14.64□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Cep57l1Q8VDS7 400 aa14.64□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 LarsQ8BMJ2 1178 aa14.64□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Rbm10Q99KG3 930 aaKnown RBP14.64□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Adck5Q80V03 582 aa14.63□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 SrrtQ99MR6 875 aaKnown RBP14.63□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Arhgap5P97393 1501 aa14.63□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Larp1Q6ZQ58 1072 aaKnown RBP14.63□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 BbxQ8VBW5 907 aa14.63□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 IncenpQ9WU62 880 aa14.63□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Ddx46Q569Z5 1032 aaKnown RBP14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Mphosph10Q810V0 681 aaKnown RBP14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Mipol1Q9D9F8 279 aa14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Spata24Q6P926 205 aa14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Rpgrip1lQ8CG73 1264 aa14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Nol12Q8BG17 217 aa14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Efcab5A0JP43 1406 aa14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Cnnm3Q32NY4 713 aa14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 NinlQ6ZQ12 1394 aa14.62□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 CenphQ9QYM8 241 aa14.61□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Prpf4bQ61136 1007 aaKnown RBP14.61□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Slu7Q8BHJ9 585 aa14.61□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Olfml1Q8BSH2 233 aa14.61□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Stk3Q9JI10 497 aa14.61□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Erlin1Q91X78 346 aa14.61□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Eva1cP58659 440 aa14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 PsapQ61207 557 aaKnown RBP14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Sel1lQ9Z2G6 790 aa14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 TbcaP48428 108 aaKnown RBP14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Lamb3Q61087 1168 aa14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Ift57Q8BXG3 429 aa14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Wasf1Q8R5H6 559 aa14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Arhgef18Q6P9R4 1021 aa14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Cdc45Q9Z1X9 566 aa14.6□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Trim30cD3YVI9 513 aa14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Gm7361D3Z6R1 267 aa14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Sptbn5F6UCX4 1208 aa14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Chrna2Q91X60 512 aa14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 TefQ9JLC6 301 aa14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Znf710Q3U288 666 aa14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Cfap53Q9D439 514 aa14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Wdr33Q8K4P0 1330 aaKnown RBP14.59□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Pafah1b1P63005 410 aaKnown RBP14.58□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Ppp6r1Q7TSI3 856 aa14.58□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Top2aQ01320 1528 aaKnown RBP14.58□□□□□ -0.07
Vcpip1-201ENSMUST00000057438 Ift140E9PY46 1464 aa14.58□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Pdcl2Q78Y63 240 aa14.58□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Krt84Q99M73 603 aa14.58□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Phldb1Q6PDH0 1371 aaKnown RBP14.58□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Nphp1Q9QY53 687 aa14.58□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Washc2Q6PGL7 1334 aa14.57□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Cep131Q62036 1060 aa14.57□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Ncbp1Q3UYV9 790 aaKnown RBP14.57□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 StambpQ9CQ26 424 aa14.57□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Eif5P59325 429 aaKnown RBP14.57□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Kcnh8P59111 1102 aa14.57□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Nap1l5Q9JJF0 156 aa14.57□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 PrkcshO08795 521 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 BcanQ61361 883 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Rufy2Q8R4C2 606 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 HypkQ9CR41 129 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Washc4Q3UMB9 1173 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Nup88Q8CEC0 753 aaKnown RBP14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Gnl2Q99LH1 728 aaKnown RBP14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Cetn2Q9R1K9 172 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Mctp1E9PV86 951 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Smtnl1Q99LM3 459 aa14.56□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Gm10471E9Q1C7 252 aa14.55□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Iqgap2Q3UQ44 1575 aa14.55□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Dydc1Q9D9T0 175 aa14.55□□□□□ -0.08
Vcpip1-201ENSMUST00000057438 Rnf187Q8BFX1 236 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms