RNA–Protein interactions for RNA: ENSMUST00000055506.8

Gtf3c1-201, Transcript of General transcription factor 3C polypeptide 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Gtf3c1, Length 6,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c1-201ENSMUST00000055506 Mphosph10Q810V0 681 aaKnown RBP13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Homer1Q9Z2Y3 366 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Tex13c2A0A0G2JGA3 530 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Map9Q3TRR0 646 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Vps37cQ8R105 352 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Pds5bQ4VA53 1446 aaKnown RBP13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Psma5Q9Z2U1 241 aaKnown RBP13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Fam184bQ0KK56 942 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Zscan10Q3URR7 782 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 MicalclQ9D5U9 680 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Map2k1P31938 393 aa13.15□□□□□ -0.3
Gtf3c1-201ENSMUST00000055506 Uri1Q3TLD5 531 aa13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Nol8Q3UHX0 1147 aaKnown RBP13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Gtf3c5Q8R2T8 520 aa13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Slu7Q8BHJ9 585 aa13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Mcm3P25206 812 aaKnown RBP13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 L1td1Q587J6 782 aaKnown RBP13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Sv2bQ8BG39 683 aa13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Ap3b2Q9JME5 1082 aa13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Kdm5dQ62240 1548 aa13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Zeb2Q9R0G7 1215 aa13.14□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 TchpQ3TVW5 497 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Klf15Q9EPW2 415 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Ccdc88bQ4QRL3 1481 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Tango6Q8C3S2 1079 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Nat10Q8K224 1024 aaKnown RBP13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Q9D9S1 216 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Trerf1Q8BXJ2 1205 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Fam107bQ3TGF2 131 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Pmfbp1Q9WVQ0 1022 aa13.13□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Agtpbp1Q641K1 1218 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 AnlnQ8K298 1121 aaKnown RBP13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Mipol1Q9D9F8 279 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Sptbn5F6UCX4 1208 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Slc4a2P13808 1237 aaKnown RBP13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 1700010I14RikQ7TPG0 532 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Pabpn1Q8CCS6 302 aaKnown RBP13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Gm21190A0A0G2JGJ6 266 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Cetn4Q8K4K1 168 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Rpap1Q80TE0 1409 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Apaf1O88879 1249 aa13.12□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Skor1Q8BX46 964 aa13.11□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 NcapgE9PWG6 1004 aa13.11□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Znf131Q8K3J5 619 aa13.11□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Ppp4r3bQ922R5 820 aa13.11□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Dnajc2P54103 621 aaKnown RBP13.11□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Rbm27Q5SFM8 1060 aaKnown RBP13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Vps41Q5KU39 853 aa13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 ClasrpQ8CFC7 668 aa13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Kif18aQ91WD7 886 aa13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Tspyl3Q3UYP3 334 aa13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 RalylQ8BTF8 293 aa13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Fam177a1Q8BR63 207 aa13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Nup88Q8CEC0 753 aaKnown RBP13.1□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 PdiltQ9DAN1 588 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Sel1lQ9Z2G6 790 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Zkscan2G3X952 960 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 HdgfP51859 237 aaKnown RBP13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Krt85Q9Z2T6 507 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Eva1cP58659 440 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Zfp444Q3TDV8 331 aaKnown RBP13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Pip4k2bQ80XI4 416 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 IkQ9Z1M8 557 aaKnown RBP13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Chmp7Q8R1T1 451 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 IncenpQ9WU62 880 aa13.09□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Erc1Q99MI1 1120 aa13.08□□□□□ -0.31
Gtf3c1-201ENSMUST00000055506 Paip2Q9D6V8 124 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Cep162Q6ZQ06 1403 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Dapk1Q80YE7 1442 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Gas2l3Q3UWW6 683 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 CenpqQ9CPQ5 267 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Gm18336A0A140LIU8 765 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Pafah1b1P63005 410 aaKnown RBP13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Als2cr12Q8BVM7 383 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Shq1Q7TMX5 569 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 4921504E06RikQ8CET2 560 aa13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 TbcaP48428 108 aaKnown RBP13.08□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Cdca7Q9D0M2 382 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Nol7Q9D7Z3 254 aaKnown RBP13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Phldb2Q8K1N2 1249 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Odf2lQ9D478 642 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Cavin1O54724 392 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Jakmip3Q5DTN8 844 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Ccdc112A0AUP1 442 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Smc1bQ920F6 1248 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Rcan3Q9JKK0 239 aa13.07□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Map3k7clP58500 142 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Ppfia3P60469 1194 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Washc4Q3UMB9 1173 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Maats1Q8BRC6 783 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Fsd1Q7TPM6 496 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 IqcgQ80W32 419 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Gjc1P28229 396 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Tspyl2Q7TQI8 677 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Lemd3Q9WU40 921 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Swt1Q9DBQ9 907 aa13.06□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Jade2Q6ZQF7 829 aa13.05□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Pof1bQ8K4L4 587 aa13.05□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Rnf34Q99KR6 376 aa13.05□□□□□ -0.32
Gtf3c1-201ENSMUST00000055506 Plekhh1Q80TI1 1356 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms