RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Cnnm1Q0GA42 951 aa11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Odf2lQ9D478 642 aa11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Polr1aO35134 1717 aaKnown RBP11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Zpr1Q62384 459 aa11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Pabpn1Q8CCS6 302 aaKnown RBP11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Smc2Q8CG48 1191 aaKnown RBP11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Stk38Q91VJ4 465 aa11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Myom3A2ABU4 1439 aa11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 Tmco3Q8BH01 678 aa11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 NefhP19246 1090 aa11.73□□□□□ -0.53
Syne1-201ENSMUST00000041639 SelenooQ9DBC0 667 aa11.72□□□□□ -0.53
Syne1-201ENSMUST00000041639 Rad54l2Q99NG0 1466 aa11.72□□□□□ -0.53
Syne1-201ENSMUST00000041639 Rrp9Q91WM3 475 aaKnown RBP11.72□□□□□ -0.53
Syne1-201ENSMUST00000041639 Dhx9O70133 1380 aaKnown RBP11.72□□□□□ -0.53
Syne1-201ENSMUST00000041639 Top2aQ01320 1528 aaKnown RBP11.72□□□□□ -0.53
Syne1-201ENSMUST00000041639 Sptbn5F6UCX4 1208 aa11.72□□□□□ -0.53
Syne1-201ENSMUST00000041639 Gnl3lQ6PGG6 577 aaKnown RBP11.71□□□□□ -0.53
Syne1-201ENSMUST00000041639 TnmdQ9EP64 317 aa11.71□□□□□ -0.53
Syne1-201ENSMUST00000041639 Ncapd3Q6ZQK0 1506 aa11.71□□□□□ -0.53
Syne1-201ENSMUST00000041639 Nop14Q8R3N1 860 aaKnown RBP11.71□□□□□ -0.53
Syne1-201ENSMUST00000041639 Phf14Q9D4H9 881 aa11.71□□□□□ -0.53
Syne1-201ENSMUST00000041639 Ggnbp2Q5SV77 696 aa11.71□□□□□ -0.54
Syne1-201ENSMUST00000041639 ScribQ80U72 1612 aa11.71□□□□□ -0.54
Syne1-201ENSMUST00000041639 Srgap3Q812A2 1099 aa11.71□□□□□ -0.54
Syne1-201ENSMUST00000041639 Sirt1Q923E4 737 aa11.71□□□□□ -0.54
Syne1-201ENSMUST00000041639 TefQ9JLC6 301 aa11.71□□□□□ -0.54
Syne1-201ENSMUST00000041639 Kif3cO35066 796 aa11.7□□□□□ -0.54
Syne1-201ENSMUST00000041639 Podxl2Q8CAE9 603 aa11.7□□□□□ -0.54
Syne1-201ENSMUST00000041639 Fez1Q8K0X8 392 aa11.7□□□□□ -0.54
Syne1-201ENSMUST00000041639 Smg7Q5RJH6 1138 aaKnown RBP11.7□□□□□ -0.54
Syne1-201ENSMUST00000041639 Arhgap5P97393 1501 aa11.7□□□□□ -0.54
Syne1-201ENSMUST00000041639 Washc4Q3UMB9 1173 aa11.7□□□□□ -0.54
Syne1-201ENSMUST00000041639 Atf3Q60765 181 aa11.7□□□□□ -0.54
Syne1-201ENSMUST00000041639 Tfip11Q9ERA6 838 aaKnown RBP11.69□□□□□ -0.54
Syne1-201ENSMUST00000041639 Frmd3Q8BHD4 595 aa11.69□□□□□ -0.54
Syne1-201ENSMUST00000041639 Efcab5A0JP43 1406 aa11.69□□□□□ -0.54
Syne1-201ENSMUST00000041639 PsapQ61207 557 aaKnown RBP11.69□□□□□ -0.54
Syne1-201ENSMUST00000041639 Plekhg5Q66T02 1073 aa11.69□□□□□ -0.54
Syne1-201ENSMUST00000041639 Larp1bA0A0A6YXJ7 370 aaKnown RBP11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Mctp1E9PV86 951 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Tspyl2Q7TQI8 677 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Commd10Q8JZY2 202 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Cwc15Q9JHS9 229 aaKnown RBP11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Map3k13Q1HKZ5 959 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Paf1Q8K2T8 535 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Paxip1Q6NZQ4 1056 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Dusp9Q7TNL7 452 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Cdk19Q8BWD8 501 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 OptnQ8K3K8 584 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Bcl11bQ99PV8 884 aa11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 Rbm5Q91YE7 815 aaKnown RBP11.68□□□□□ -0.54
Syne1-201ENSMUST00000041639 TbcaP48428 108 aaKnown RBP11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Prpf4bQ61136 1007 aaKnown RBP11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Lrrcc1Q69ZB0 1026 aa11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Pip4k2bQ80XI4 416 aa11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 CarsQ9ER72 831 aaKnown RBP11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Iqgap2Q3UQ44 1575 aa11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Arhgef5E9Q7D5 1581 aa11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Arap1Q4LDD4 1452 aa11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 CastP51125 788 aa11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Cdc37l1Q9CZP7 335 aa11.67□□□□□ -0.54
Syne1-201ENSMUST00000041639 Stard3nlQ9DCI3 235 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Maco1Q7TQE6 664 aaKnown RBP11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Krt85Q9Z2T6 507 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 L3mbtl2P59178 703 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Arhgap31A6X8Z5 1425 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Exoc6bA6H5Z3 810 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Bag1Q60739 355 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Ppp4r3bQ922R5 820 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Ccdc96Q9CR92 584 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 PalmQ9Z0P4 383 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Kdm4aQ8BW72 1064 aa11.66□□□□□ -0.54
Syne1-201ENSMUST00000041639 Samm50Q8BGH2 469 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Chaf1aQ9QWF0 911 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Cep89Q9CZX2 791 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Erich4Q3UNU4 136 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Cpa2Q504N0 417 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Ppip5k2Q6ZQB6 1129 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Fsd1Q7TPM6 496 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Dennd6aQ8BH65 605 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Slc13a4Q8BZ82 625 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Sel1lQ9Z2G6 790 aa11.65□□□□□ -0.54
Syne1-201ENSMUST00000041639 Syce3B5KM66 88 aa11.65□□□□□ -0.55
Syne1-201ENSMUST00000041639 Cep112Q5PR68 954 aa11.65□□□□□ -0.55
Syne1-201ENSMUST00000041639 Kiaa0753Q6A000 959 aa11.65□□□□□ -0.55
Syne1-201ENSMUST00000041639 Eif5P59325 429 aaKnown RBP11.64□□□□□ -0.55
Syne1-201ENSMUST00000041639 Znf771Q8BJ90 317 aa11.64□□□□□ -0.55
Syne1-201ENSMUST00000041639 Top1mtQ8R4U6 593 aa11.64□□□□□ -0.55
Syne1-201ENSMUST00000041639 Gtf2a1Q99PM3 378 aa11.64□□□□□ -0.55
Syne1-201ENSMUST00000041639 Hap1O35668 628 aa11.64□□□□□ -0.55
Syne1-201ENSMUST00000041639 Dnajc2P54103 621 aaKnown RBP11.64□□□□□ -0.55
Syne1-201ENSMUST00000041639 Dctn1O08788 1281 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Znf692Q3U381 531 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Ehmt1Q5DW34 1296 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Klf15Q9EPW2 415 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Lamb3Q61087 1168 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Secisbp2lQ6A098 1086 aaKnown RBP11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Tango6Q8C3S2 1079 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Tubb6Q922F4 447 aa11.63□□□□□ -0.55
Syne1-201ENSMUST00000041639 Cep57l1Q8VDS7 400 aa11.63□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 86.7 ms