RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Hs1bp3Q3TC93 395 aa19.03■□□□□ 0.64
Nup54-201ENSMUST00000038514 Antxr1Q9CZ52 562 aa19.03■□□□□ 0.64
Nup54-201ENSMUST00000038514 Knl1Q66JQ7 1612 aa19.03■□□□□ 0.64
Nup54-201ENSMUST00000038514 Ptch1Q61115 1434 aa19.02■□□□□ 0.64
Nup54-201ENSMUST00000038514 Uhrf1bp1B2KF50 1429 aa19.02■□□□□ 0.63
Nup54-201ENSMUST00000038514 Znf541Q0GGX2 1363 aa19.02■□□□□ 0.63
Nup54-201ENSMUST00000038514 AU019823E9PUQ3 292 aa19.01■□□□□ 0.63
Nup54-201ENSMUST00000038514 Cluap1Q8R3P7 413 aa19.01■□□□□ 0.63
Nup54-201ENSMUST00000038514 CltcQ68FD5 1675 aaKnown RBP19.01■□□□□ 0.63
Nup54-201ENSMUST00000038514 CastP51125 788 aa19.01■□□□□ 0.63
Nup54-201ENSMUST00000038514 Usp32F8VPZ3 1604 aa19.01■□□□□ 0.63
Nup54-201ENSMUST00000038514 Ttc21aQ8C0S4 1314 aa19■□□□□ 0.63
Nup54-201ENSMUST00000038514 Arhgap23Q69ZH9 1483 aa18.99■□□□□ 0.63
Nup54-201ENSMUST00000038514 Kif2cQ922S8 721 aa18.99■□□□□ 0.63
Nup54-201ENSMUST00000038514 Amer1Q7TS75 1132 aa18.98■□□□□ 0.63
Nup54-201ENSMUST00000038514 Adamts7Q68SA9 1657 aa18.98■□□□□ 0.63
Nup54-201ENSMUST00000038514 Ankrd50F7BE84 1390 aa18.98■□□□□ 0.63
Nup54-201ENSMUST00000038514 RereQ80TZ9 1558 aa18.98■□□□□ 0.63
Nup54-201ENSMUST00000038514 Dip2cE9PWR4 1557 aa18.97■□□□□ 0.63
Nup54-201ENSMUST00000038514 Mfap1aC0HKD8 439 aaKnown RBP18.97■□□□□ 0.63
Nup54-201ENSMUST00000038514 Mfap1bC0HKD9 439 aaKnown RBP18.97■□□□□ 0.63
Nup54-201ENSMUST00000038514 Exosc9Q9JHI7 438 aaKnown RBP18.97■□□□□ 0.63
Nup54-201ENSMUST00000038514 Ciz1Q8VEH2 845 aa18.96■□□□□ 0.63
Nup54-201ENSMUST00000038514 Maco1Q7TQE6 664 aaKnown RBP18.96■□□□□ 0.63
Nup54-201ENSMUST00000038514 Arhgef28P97433 1693 aa18.95■□□□□ 0.62
Nup54-201ENSMUST00000038514 PaskQ8CEE6 1383 aa18.95■□□□□ 0.62
Nup54-201ENSMUST00000038514 Cavin4A2AMM0 362 aa18.95■□□□□ 0.62
Nup54-201ENSMUST00000038514 Map7O88735 730 aa18.95■□□□□ 0.62
Nup54-201ENSMUST00000038514 Zranb1Q7M760 708 aa18.95■□□□□ 0.62
Nup54-201ENSMUST00000038514 Cep170bQ80U49 1574 aa18.94■□□□□ 0.62
Nup54-201ENSMUST00000038514 Catsper2A2ARP9 588 aa18.94■□□□□ 0.62
Nup54-201ENSMUST00000038514 Cul9Q80TT8 1865 aa18.94■□□□□ 0.62
Nup54-201ENSMUST00000038514 Kcnn1Q9EQR3 537 aa18.93■□□□□ 0.62
Nup54-201ENSMUST00000038514 Ccdc171E9Q1U1 1324 aa18.93■□□□□ 0.62
Nup54-201ENSMUST00000038514 Ccdc60Q8C4J0 545 aa18.92■□□□□ 0.62
Nup54-201ENSMUST00000038514 Pik3r4Q8VD65 1358 aa18.92■□□□□ 0.62
Nup54-201ENSMUST00000038514 Qser1A2BIE1 1698 aa18.92■□□□□ 0.62
Nup54-201ENSMUST00000038514 Atp7bQ64446 1462 aa18.92■□□□□ 0.62
Nup54-201ENSMUST00000038514 Terf2O35144 541 aa18.92■□□□□ 0.62
Nup54-201ENSMUST00000038514 Kif18aQ91WD7 886 aa18.92■□□□□ 0.62
Nup54-201ENSMUST00000038514 FanciQ8K368 1330 aa18.92■□□□□ 0.62
Nup54-201ENSMUST00000038514 Rbm25B2RY56 838 aaKnown RBP18.91■□□□□ 0.62
Nup54-201ENSMUST00000038514 Stk26Q99JT2 416 aa18.91■□□□□ 0.62
Nup54-201ENSMUST00000038514 4933402E13RikQ9D4D2 429 aa18.91■□□□□ 0.62
Nup54-201ENSMUST00000038514 Naip7Q9JIB3 1402 aa18.91■□□□□ 0.62
Nup54-201ENSMUST00000038514 Abca14E9Q8F8 1683 aa18.9■□□□□ 0.62
Nup54-201ENSMUST00000038514 Prrc2bQ7TPM1 1486 aaKnown RBP18.9■□□□□ 0.62
Nup54-201ENSMUST00000038514 SkilQ60665 675 aa18.89■□□□□ 0.61
Nup54-201ENSMUST00000038514 NinlQ6ZQ12 1394 aa18.89■□□□□ 0.61
Nup54-201ENSMUST00000038514 Znf330Q922H9 316 aa18.89■□□□□ 0.61
Nup54-201ENSMUST00000038514 Ahdc1Q6PAL7 1594 aaKnown RBP18.88■□□□□ 0.61
Nup54-201ENSMUST00000038514 Brd1E9PZ26 1189 aaKnown RBP18.88■□□□□ 0.61
Nup54-201ENSMUST00000038514 Spryd3E9Q9B3 442 aa18.88■□□□□ 0.61
Nup54-201ENSMUST00000038514 G3bp1P97855 465 aaKnown RBP18.88■□□□□ 0.61
Nup54-201ENSMUST00000038514 PtprmP28828 1452 aa18.87■□□□□ 0.61
Nup54-201ENSMUST00000038514 Cog6Q8R3I3 657 aa18.87■□□□□ 0.61
Nup54-201ENSMUST00000038514 Dnttip2Q8R2M2 758 aaKnown RBP18.86■□□□□ 0.61
Nup54-201ENSMUST00000038514 NktrP30415 1453 aa18.86■□□□□ 0.61
Nup54-201ENSMUST00000038514 AU015836B2RUM3 263 aa18.85■□□□□ 0.61
Nup54-201ENSMUST00000038514 Mcm4P49717 862 aa18.85■□□□□ 0.61
Nup54-201ENSMUST00000038514 Q4VA45 678 aa18.85■□□□□ 0.61
Nup54-201ENSMUST00000038514 Ssh1Q76I79 1042 aa18.85■□□□□ 0.61
Nup54-201ENSMUST00000038514 Pdcl3Q8BVF2 240 aa18.85■□□□□ 0.61
Nup54-201ENSMUST00000038514 Nsd3Q6P2L6 1439 aa18.85■□□□□ 0.61
Nup54-201ENSMUST00000038514 Gsto1O09131 240 aa18.84■□□□□ 0.61
Nup54-201ENSMUST00000038514 Fchsd2Q3USJ8 740 aa18.84■□□□□ 0.61
Nup54-201ENSMUST00000038514 Slc12a5Q91V14 1138 aa18.84■□□□□ 0.61
Nup54-201ENSMUST00000038514 Phf14Q9D4H9 881 aa18.84■□□□□ 0.61
Nup54-201ENSMUST00000038514 Swt1Q9DBQ9 907 aa18.84■□□□□ 0.61
Nup54-201ENSMUST00000038514 PplQ9R269 1755 aa18.84■□□□□ 0.61
Nup54-201ENSMUST00000038514 Shq1Q7TMX5 569 aa18.83■□□□□ 0.61
Nup54-201ENSMUST00000038514 Nutm1Q8BHP2 1126 aa18.83■□□□□ 0.6
Nup54-201ENSMUST00000038514 Gm10093D3YYI8 482 aa18.82■□□□□ 0.6
Nup54-201ENSMUST00000038514 Hdac1O09106 482 aaKnown RBP18.82■□□□□ 0.6
Nup54-201ENSMUST00000038514 Rangap1P46061 589 aaKnown RBP18.82■□□□□ 0.6
Nup54-201ENSMUST00000038514 KnstrnQ9D9Z1 312 aaKnown RBP18.82■□□□□ 0.6
Nup54-201ENSMUST00000038514 PalmQ9Z0P4 383 aa18.82■□□□□ 0.6
Nup54-201ENSMUST00000038514 Ncapd2Q8K2Z4 1392 aa18.82■□□□□ 0.6
Nup54-201ENSMUST00000038514 Trim28Q62318 834 aa18.82■□□□□ 0.6
Nup54-201ENSMUST00000038514 Kif20aP97329 887 aa18.81■□□□□ 0.6
Nup54-201ENSMUST00000038514 Q3UPC7 1272 aa18.81■□□□□ 0.6
Nup54-201ENSMUST00000038514 Nsfl1cQ9CZ44 370 aaKnown RBP18.81■□□□□ 0.6
Nup54-201ENSMUST00000038514 Ddit3P35639 168 aa18.8■□□□□ 0.6
Nup54-201ENSMUST00000038514 Wwc1Q5SXA9 1104 aa18.8■□□□□ 0.6
Nup54-201ENSMUST00000038514 Aldh1l1Q8R0Y6 902 aa18.8■□□□□ 0.6
Nup54-201ENSMUST00000038514 Kif13aQ9EQW7 1749 aa18.8■□□□□ 0.6
Nup54-201ENSMUST00000038514 Plekhm2Q80TQ5 1018 aa18.79■□□□□ 0.6
Nup54-201ENSMUST00000038514 Cdk19Q8BWD8 501 aa18.79■□□□□ 0.6
Nup54-201ENSMUST00000038514 MvpQ9EQK5 861 aa18.79■□□□□ 0.6
Nup54-201ENSMUST00000038514 Aplp1Q03157 653 aa18.79■□□□□ 0.6
Nup54-201ENSMUST00000038514 Atp1b4Q99ME6 356 aa18.79■□□□□ 0.6
Nup54-201ENSMUST00000038514 Cdc37l1Q9CZP7 335 aa18.79■□□□□ 0.6
Nup54-201ENSMUST00000038514 Nectin2P32507 530 aa18.78■□□□□ 0.6
Nup54-201ENSMUST00000038514 Yeats2Q3TUF7 1407 aa18.78■□□□□ 0.6
Nup54-201ENSMUST00000038514 Gtf2a1Q99PM3 378 aa18.77■□□□□ 0.6
Nup54-201ENSMUST00000038514 Spef2Q8C9J3 1734 aa18.77■□□□□ 0.6
Nup54-201ENSMUST00000038514 Plekhg1F6S200 1446 aa18.77■□□□□ 0.6
Nup54-201ENSMUST00000038514 Vamp4O70480 141 aa18.77■□□□□ 0.6
Nup54-201ENSMUST00000038514 LifrP42703 1092 aa18.77■□□□□ 0.6
Nup54-201ENSMUST00000038514 Cetn4Q8K4K1 168 aa18.77■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 26.6 ms