RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 Cdkn1cP49919 348 aa11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Ift57Q8BXG3 429 aa11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Def6Q8C2K1 630 aa11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Gm1043A0A140LJC2 1431 aa11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Polr3gQ6NXY9 223 aa11.24□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Mtus2Q3UHD3 1353 aa11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Ylpm1Q9R0I7 1386 aaKnown RBP11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Ccdc173A0JLY1 547 aa11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Catsper2A2ARP9 588 aa11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Brwd3A2AHJ4 1799 aa11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Kiaa1210E9Q0C6 1637 aa11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Arhgap4B1AUY3 965 aa11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Cspp1B2RX88 1205 aa11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Ranbp1P34022 203 aaKnown RBP11.23□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Abca9Q8K449 1623 aa11.22□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Lmo7E9PYF4 1699 aaKnown RBP11.22□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Ccdc96Q9CR92 584 aa11.22□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Dennd4bQ3U1Y4 1499 aa11.22□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Ppm1eQ80TL0 749 aa11.22□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Atp2b2Q9R0K7 1198 aa11.22□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Qser1A2BIE1 1698 aa11.21□□□□□ -0.61
Ctc1-201ENSMUST00000021278 CgnP59242 1191 aa11.21□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Nol12Q8BG17 217 aa11.21□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Fam193aQ8CGI1 1231 aaKnown RBP11.21□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Card11Q8CIS0 1159 aa11.21□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Cabp1Q9JLK7 227 aa11.21□□□□□ -0.61
Ctc1-201ENSMUST00000021278 Gtpbp6Q3U6U5 514 aa11.21□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Prdm4Q80V63 803 aa11.21□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Ice2Q3UZ18 988 aaKnown RBP11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Drc7Q6V3W6 876 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Bcl11bQ99PV8 884 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 AdnpQ9Z103 1108 aaKnown RBP11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Erich3F6QRE9 1637 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Esx1O88933 382 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Trap1aP19473 224 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Fbxo41Q6NS60 873 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Cwc22Q8C5N3 908 aaKnown RBP11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Sf3a1Q8K4Z5 791 aaKnown RBP11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Kiaa1551Q5DTW7 1521 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Gm42641I6L9G2 585 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 EzrP26040 586 aaKnown RBP11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 AtripQ8BMG1 785 aa11.2□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Dync1i1O88485 628 aa11.19□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Mknk2Q8CDB0 459 aa11.19□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Kif14L0N7N1 1674 aaKnown RBP11.19□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Ccdc146E9Q9F7 977 aa11.19□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Znf330Q922H9 316 aa11.19□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Speer4f2E9Q366 295 aa11.19□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Zbtb38Q3LR78 1197 aa11.18□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Tmed8Q3UHI4 326 aa11.18□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Rps6ka5Q8C050 863 aa11.18□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Pank1Q8K4K6 548 aa11.18□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Dip2cE9PWR4 1557 aa11.18□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Irx2P81066 474 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Fam208aQ69ZR9 1610 aaKnown RBP11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Ncapd3Q6ZQK0 1506 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Neurl4Q5NCX5 1563 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Ahdc1Q6PAL7 1594 aaKnown RBP11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 4931400O07RikQ9D4M5 137 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Fmnl2A2APV2 1086 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Mindy4Q3UQI9 744 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Rpgrip1lQ8CG73 1264 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 MycbpQ9EQS3 103 aa11.17□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Tiam1Q60610 1591 aa11.16□□□□□ -0.62
Ctc1-201ENSMUST00000021278 SrrtQ99MR6 875 aaKnown RBP11.16□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Irx5Q9JKQ4 484 aa11.16□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Ppp2r3aB2RXC8 1150 aa11.16□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Terf2O35144 541 aa11.16□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Sugp2Q8CH09 1067 aa11.16□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Spag9Q58A65 1321 aaKnown RBP11.16□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Cdc42bpaQ3UU96 1719 aa11.15□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Ctr9Q62018 1173 aaKnown RBP11.15□□□□□ -0.62
Ctc1-201ENSMUST00000021278 Smc5Q8CG46 1101 aaKnown RBP11.15□□□□□ -0.63
Ctc1-201ENSMUST00000021278 4930548H24RikQ9D496 437 aa11.15□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Arhgef40Q3UPH7 1517 aa11.15□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Ptgs1P22437 602 aa11.14□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Hvcn1Q3U2S8 269 aa11.14□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Kif16bB1AVY7 1312 aa11.14□□□□□ -0.63
Ctc1-201ENSMUST00000021278 CenpqQ9CPQ5 267 aa11.14□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Ccdc34Q3UI66 367 aa11.14□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Ankrd24Q80VM7 985 aa11.14□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Dusp9Q7TNL7 452 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Rbm42Q91V81 474 aaKnown RBP11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Adcy10Q8C0T9 1614 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Caskin1Q6P9K8 1431 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Cep63Q3UPP8 700 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 SarnpQ9D1J3 210 aaKnown RBP11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Rsph6aQ8CDR2 708 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Glipr1l2Q9CQ35 332 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Rbm33Q9CXK9 1231 aaKnown RBP11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Mns1Q61884 491 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Tspyl2Q7TQI8 677 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Bank1Q80VH0 783 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 GphnQ8BUV3 769 aaKnown RBP11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Chd1lQ9CXF7 900 aa11.13□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Rundc1Q0VDN7 615 aa11.12□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Gps2Q921N8 327 aa11.12□□□□□ -0.63
Ctc1-201ENSMUST00000021278 CrebrfQ8CDG5 640 aaKnown RBP11.12□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Prdm16A2A935 1275 aa11.12□□□□□ -0.63
Ctc1-201ENSMUST00000021278 Ccar1Q8CH18 1146 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 19.8 ms