RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 Arid4bA2CG63 1314 aaKnown RBP12.93□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Nckap5lQ6GQX2 1323 aa12.93□□□□□ -0.34
Rnft1-201ENSMUST00000020827 NeflP08551 543 aa12.93□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Aifm3Q3TY86 605 aa12.93□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Arhgef28P97433 1693 aa12.92□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Ak7Q9D2H2 614 aa12.92□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Pibf1E9Q6K3 756 aa12.92□□□□□ -0.34
Rnft1-201ENSMUST00000020827 HnrnpmQ9D0E1 729 aaKnown RBP12.92□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Plxnc1Q9QZC2 1574 aa12.91□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Ttc41Q692V3 1318 aa12.91□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Med14A2ABV5 1459 aaKnown RBP12.91□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Dmrtc1Q9D9R7 182 aa12.91□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Ttc37F8VPK0 1563 aa12.91□□□□□ -0.34
Rnft1-201ENSMUST00000020827 IqubQ8CDK3 788 aa12.91□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Trim30dE9PWL0 497 aa12.91□□□□□ -0.34
Rnft1-201ENSMUST00000020827 Sox12Q04890 314 aa12.89□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Cabp2Q9JLK4 216 aa12.89□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Maco1Q7TQE6 664 aaKnown RBP12.89□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Tmco5bQ80X59 307 aa12.88□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Gsto1O09131 240 aa12.88□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Gm6268A2A3U9 297 aa12.88□□□□□ -0.35
Rnft1-201ENSMUST00000020827 CanxP35564 591 aaKnown RBP12.88□□□□□ -0.35
Rnft1-201ENSMUST00000020827 CenpjQ569L8 1344 aa12.87□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Arhgap23Q69ZH9 1483 aa12.87□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Txndc2Q6P902 515 aa12.87□□□□□ -0.35
Rnft1-201ENSMUST00000020827 NudcO35685 332 aaKnown RBP12.87□□□□□ -0.35
Rnft1-201ENSMUST00000020827 MpripP97434 1024 aa12.86□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Map4k4P97820 1233 aaKnown RBP12.86□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Ccdc60Q8C4J0 545 aa12.86□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Adamts7Q68SA9 1657 aa12.86□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Usp32F8VPZ3 1604 aa12.86□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Nwd1A6H603 1563 aa12.86□□□□□ -0.35
Rnft1-201ENSMUST00000020827 CalcaP70160 136 aa12.86□□□□□ -0.35
Rnft1-201ENSMUST00000020827 CastP51125 788 aa12.85□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Hecw2Q6I6G8 1578 aa12.85□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Slc35g1Q8BY79 368 aa12.85□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Slc52a2Q9D8F3 450 aa12.85□□□□□ -0.35
Rnft1-201ENSMUST00000020827 1700019A02RikA0A087WPV9 146 aa12.84□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Kif2cQ922S8 721 aa12.84□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Ralbp1Q62172 648 aa12.84□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Prim1P20664 417 aa12.84□□□□□ -0.35
Rnft1-201ENSMUST00000020827 EspnQ9ET47 871 aa12.84□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Rbm25B2RY56 838 aaKnown RBP12.84□□□□□ -0.35
Rnft1-201ENSMUST00000020827 Stk11ipQ3TAA7 1072 aa12.83□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Pik3c2bE9QAN8 1632 aa12.83□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Ankrd50F7BE84 1390 aa12.82□□□□□ -0.36
Rnft1-201ENSMUST00000020827 U2surpQ6NV83 1029 aaKnown RBP12.82□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Nkx2-3P97334 362 aa12.81□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Kif20bQ80WE4 1774 aaKnown RBP12.81□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Ccdc183A2AJB1 534 aa12.81□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Spryd3E9Q9B3 442 aa12.81□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Psme1P97371 249 aa12.8□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Nsfl1cQ9CZ44 370 aaKnown RBP12.8□□□□□ -0.36
Rnft1-201ENSMUST00000020827 PplQ9R269 1755 aa12.8□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Idi1P58044 227 aa12.8□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Trim58Q5NCC9 485 aa12.8□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Upf2A2AT37 1269 aaKnown RBP12.79□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Ggnbp2Q5SV77 696 aa12.79□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Q3UPC7 1272 aa12.79□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Trim28Q62318 834 aa12.79□□□□□ -0.36
Rnft1-201ENSMUST00000020827 KdrP35918 1367 aa12.79□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Parp14Q2EMV9 1817 aa12.79□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Stard8Q8K031 1019 aa12.79□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Eif2ak4Q9QZ05 1648 aa12.78□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Vamp4O70480 141 aa12.78□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Nsd3Q6P2L6 1439 aa12.78□□□□□ -0.36
Rnft1-201ENSMUST00000020827 RictorQ6QI06 1708 aa12.78□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.78□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Myt1Q8CFC2 1127 aa12.78□□□□□ -0.36
Rnft1-201ENSMUST00000020827 NpatQ8BMA5 1420 aa12.77□□□□□ -0.36
Rnft1-201ENSMUST00000020827 Eif4a2P10630 407 aa12.77□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Plekhm2Q80TQ5 1018 aa12.77□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Pcdh10E9PXQ7 1057 aa12.77□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Tmem132eQ6IEE6 982 aa12.77□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Mdc1Q5PSV9 1707 aa12.77□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Ttc21aQ8C0S4 1314 aa12.77□□□□□ -0.37
Rnft1-201ENSMUST00000020827 DiexfQ8BTT6 772 aaKnown RBP12.76□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Irx6Q9ER75 438 aa12.76□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Synj2Q9D2G5 1434 aa12.75□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Rsph6aQ8CDR2 708 aa12.75□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Cc2d1aQ8K1A6 943 aa12.75□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Cog6Q8R3I3 657 aa12.75□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Cdc37l1Q9CZP7 335 aa12.75□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Adamtsl3G3UXC7 1706 aa12.75□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Tnpo1Q8BFY9 898 aaKnown RBP12.74□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Smarca5Q91ZW3 1051 aaKnown RBP12.74□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Mfap1aC0HKD8 439 aaKnown RBP12.73□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Mfap1bC0HKD9 439 aaKnown RBP12.73□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Cavin4A2AMM0 362 aa12.73□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Camta1A2A891 1682 aa12.73□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Pik3r4Q8VD65 1358 aa12.73□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Ddx17Q501J6 650 aaKnown RBP12.72□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Ccdc27Q3V036 639 aa12.72□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Dnai1Q8C0M8 701 aa12.72□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Usp16Q99LG0 825 aa12.72□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Chmp4cQ9D7F7 232 aa12.72□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Mapk8ip3Q9ESN9 1337 aa12.72□□□□□ -0.37
Rnft1-201ENSMUST00000020827 Ccar1Q8CH18 1146 aaKnown RBP12.71□□□□□ -0.37
Rnft1-201ENSMUST00000020827 DaxxO35613 739 aa12.71□□□□□ -0.38
Rnft1-201ENSMUST00000020827 Hsp90ab1P11499 724 aaKnown RBP12.71□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms