RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 A0A087WZ62 844 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 MYOCOSA0A1B0GUC4 107 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 G3V2L1 256 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 HCRTO43612 131 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 DNAJA2O60884 412 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 LTFP02788 710 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 TFAP2AP05549 437 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 PYGLP06737 847 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 TGFB3P10600 412 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 PIK3R1P27986 724 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 GARSP41250 739 aaKnown RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 PTPN9P43378 593 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 THOP1P52888 689 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 RBP5P82980 135 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 NAB1Q13506 487 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 GK3PQ14409 553 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 CNGA3Q16281 694 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 AMHR2Q16671 573 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 CCDC153Q494R4 210 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 PABPC1LQ4VXU2 614 aaKnown RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 POTEAQ6S8J7 498 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 RBM44Q6ZP01 1051 aaKnown RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 TDRD5Q8NAT2 981 aaKnown RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 P2RY11Q96G91 374 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 HIC2Q96JB3 615 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 DNAJC1Q96KC8 554 aaKnown RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 FDXACB1Q9BRP7 624 aaPredicted RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 C11orf84Q9BUA3 381 aaPredicted RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 DNAJC5Q9H3Z4 198 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 EPB41L1Q9H4G0 881 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 TCF7L2Q9NQB0 619 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 STK39Q9UEW8 545 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 SNX9Q9Y5X1 595 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 PPEF2O14830 753 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 VILLO15195 856 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 CREB3O43889 395 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 TOMM70O94826 608 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 AMHP03971 560 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 CHRNGP07510 517 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 XRCC1P18887 633 aaPredicted RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 GLDCP23378 1020 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 ACAT1P24752 427 aaKnown RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 RANBP1P43487 201 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 CCR10P46092 362 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 ATXN3P54252 364 aaPredicted RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 TNFAIP2Q03169 654 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 FAM131BQ86XD5 332 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 EXOC8Q8IYI6 725 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 METTL25Q8N6Q8 603 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 C7orf31Q8N865 590 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 FAM81AQ8TBF8 368 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 ADAM32Q8TC27 787 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 CPNE1Q99829 537 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 VPS33BQ9H267 617 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 CXCL16Q9H2A7 254 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 TMPRSS4Q9NRS4 437 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 C6orf203Q9P0P8 240 aaPredicted RBP11.17□□□□□ -0.62
SNIP1-204ENST00000638725 ATXN10Q9UBB4 475 aa11.17□□□□□ -0.62
SNIP1-204ENST00000638725 DENRO43583 198 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ATP9BO43861 1147 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 USP12O75317 370 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CRTAMO95727 393 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CLPTM1O96005 669 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 POLBP06746 335 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 LCP1P13796 627 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ARF4P18085 180 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 MPSTP25325 297 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ARL4AP40617 200 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 PKNOX1P55347 436 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 MAP7Q14244 749 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 NADK2Q4G0N4 442 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CELF3Q5SZQ8 465 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 TREML2Q5T2D2 321 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 GRTP1Q5TC63 336 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 FSTL4Q6MZW2 842 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 PLPPR4Q7Z2D5 763 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 STRA8Q7Z7C7 330 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 TP53INP2Q8IXH6 220 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 HACE1Q8IYU2 909 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 DSELQ8IZU8 1212 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 RNF148Q8N7C7 305 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 OR52K1Q8NGK4 314 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CENPIQ92674 756 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 ZNF669Q96BR6 464 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 DGCR14Q96DF8 476 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 KIF12Q96FN5 646 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CNBD2Q96M20 576 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 CDRT15Q96T59 188 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 AGAP2Q99490 1192 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 RBBP8Q99708 897 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 GATA5Q9BWX5 397 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 DPEP3Q9H4B8 488 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 EIF2B3Q9NR50 452 aaKnown RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 APPL1Q9UKG1 709 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 MAGED2Q9UNF1 606 aaPredicted RBP11.16□□□□□ -0.62
SNIP1-204ENST00000638725 LZTS1Q9Y250 596 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 AP4B1Q9Y6B7 739 aa11.16□□□□□ -0.62
SNIP1-204ENST00000638725 A0A096LPK6 155 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms