RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 LPAL2Q16609 132 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 CDO1Q16878 200 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 FNDC3BQ53EP0 1204 aaKnown RBP17.26■□□□□ 0.35
UBE3D-208ENST00000626828 HGSNATQ68CP4 663 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 SPECC1LQ69YQ0 1117 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 DRC7Q8IY82 874 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 GPR161Q8N6U8 529 aaKnown RBP17.26■□□□□ 0.35
UBE3D-208ENST00000626828 KDM1BQ8NB78 822 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 CYB5D2Q8WUJ1 264 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.26■□□□□ 0.35
UBE3D-208ENST00000626828 INTS6Q9UL03 887 aaKnown RBP17.26■□□□□ 0.35
UBE3D-208ENST00000626828 INVSQ9Y283 1065 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 RAD54BQ9Y620 910 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 THADAQ6YHU6 1953 aa17.26■□□□□ 0.35
UBE3D-208ENST00000626828 I6L893 689 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-208ENST00000626828 MAP3K13O43283 966 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 ZNF217O75362 1048 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 GYPCP04921 128 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 P2RY2P41231 377 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 RPL7AP62424 266 aaKnown RBP17.25■□□□□ 0.35
UBE3D-208ENST00000626828 SULT2A1Q06520 285 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 MAMLD1Q13495 774 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 TRIM14Q14142 442 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 ELF2Q15723 593 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 PTPRNQ16849 979 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 PLEKHG6Q3KR16 790 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 FUT11Q495W5 492 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 PLK5Q496M5 336 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 TDRD12Q587J7 1177 aaKnown RBP17.25■□□□□ 0.35
UBE3D-208ENST00000626828 PITRM1Q5JRX3 1037 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 PPP1R15BQ5SWA1 713 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 SH3PXD2AQ5TCZ1 1133 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 PLEKHA7Q6IQ23 1121 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-208ENST00000626828 METTL3Q86U44 580 aaKnown RBP17.25■□□□□ 0.35
UBE3D-208ENST00000626828 KBTBD6Q86V97 674 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 FAM160A2Q8N612 972 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-208ENST00000626828 FAM172AQ8WUF8 416 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 TRIM11Q96F44 468 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 CNPY3Q9BT09 278 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 ISCUQ9H1K1 167 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 OSBPL2Q9H1P3 480 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 DUSP15Q9H1R2 295 aaPredicted RBP17.25■□□□□ 0.35
UBE3D-208ENST00000626828 TMEM245Q9H330 911 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 ADAMTS1Q9UHI8 967 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 TBC1D30Q9Y2I9 924 aa17.25■□□□□ 0.35
UBE3D-208ENST00000626828 DCLK1O15075 740 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 SRGAP2O75044 1071 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 SRPRAP08240 638 aaKnown RBP17.24■□□□□ 0.35
UBE3D-208ENST00000626828 TPM1P09493 284 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 MYBL1P10243 752 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 HNRNPH3P31942 346 aaKnown RBP17.24■□□□□ 0.35
UBE3D-208ENST00000626828 GGCXP38435 758 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 NNMTP40261 264 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 HDAC4P56524 1084 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 ECT2LQ008S8 904 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 TSR1Q2NL82 804 aaKnown RBP17.24■□□□□ 0.35
UBE3D-208ENST00000626828 CIR1Q86X95 450 aaPredicted RBP17.24■□□□□ 0.35
UBE3D-208ENST00000626828 TMPRSS6Q8IU80 811 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 ZNF683Q8IZ20 524 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 APCDD1Q8J025 514 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 DCLK2Q8N568 766 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 OR8K1Q8NGG5 319 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 RLN3Q8WXF3 142 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 SPACA7Q96KW9 195 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 MRGPRX1Q96LB2 322 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 MCEEQ96PE7 176 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 RETREG1Q9H6L5 497 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 PRDM16Q9HAZ2 1276 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 TMPRSS4Q9NRS4 437 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 OR12D3Q9UGF7 316 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 ERVW-1Q9UQF0 538 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 SNX10Q9Y5X0 201 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 ZNF292O60281 2723 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 DOCK4Q8N1I0 1966 aa17.24■□□□□ 0.35
UBE3D-208ENST00000626828 IGLV3-10A0A075B6K4 115 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 E9PAM4 449 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 LRP3O75074 770 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 CNTN5O94779 1100 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 HLA-EP13747 358 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 NDUFV2P19404 249 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 PRKCHP24723 683 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 NRG1Q02297 640 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-208ENST00000626828 CAMK2GQ13555 558 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-208ENST00000626828 MAP7D1Q3KQU3 841 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 RAB6CQ53S08 254 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 CXorf57Q6NSI4 855 aaKnown RBP17.23■□□□□ 0.35
UBE3D-208ENST00000626828 SLFN11Q7Z7L1 901 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 SETD3Q86TU7 594 aaPredicted RBP17.23■□□□□ 0.35
UBE3D-208ENST00000626828 VSTM4Q8IW00 320 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 NTAN1Q96AB6 310 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 ERLEC1Q96DZ1 483 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 FEM1AQ9BSK4 669 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 RAB6CQ9H0N0 254 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 FBRSQ9HAH7 460 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 MRPL47Q9HD33 250 aaKnown RBP17.23■□□□□ 0.35
UBE3D-208ENST00000626828 PPARGC1AQ9UBK2 798 aaKnown RBP17.23■□□□□ 0.35
UBE3D-208ENST00000626828 CNOT8Q9UFF9 292 aaKnown RBP17.23■□□□□ 0.35
UBE3D-208ENST00000626828 MYO15AQ9UKN7 3530 aa17.23■□□□□ 0.35
UBE3D-208ENST00000626828 CKAP5Q14008 2032 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms