RNA–Protein interactions for RNA: ENST00000616538.4

NUMA1-233, Transcript of nuclear mitotic apparatus protein 1, human

APPRIS ALT2 TSL 5 BASIC

Gene NUMA1, Length 6,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUMA1-233	ENST00000616538	FAM153A	Q9UHL3	310 aa		13.3	□□□□□ -0.28
NUMA1-233	ENST00000616538	CCT8L1P	A6NM43	557 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	SLC9A3R1	O14745	358 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	IRF6	O14896	467 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	FLT3	P36888	993 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	C1QBP	Q07021	282 aa	Known RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	FGD3	Q5JSP0	725 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	CXorf40B	Q96DE9	158 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	PANX3	Q96QZ0	392 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	NAT9	Q9BTE0	207 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	PRRG3	Q9BZD7	231 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	POMK	Q9H5K3	350 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538		E5RJQ4	531 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	GZMA	P12544	262 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	PGAM1	P18669	254 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	PEX5	P50542	639 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	CATSPERG	Q6ZRH7	1159 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	DNAJC9	Q8WXX5	260 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	DEFB118	Q96PH6	123 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	CDC42EP4	Q9H3Q1	356 aa	Known RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	MKL2	Q9ULH7	1088 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	KCNK1	O00180	336 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	UBD	O15205	165 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	KRT33A	O76009	404 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	RARG	P13631	454 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	HPCAL1	P37235	193 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	MAD2L1	Q13257	205 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	DGKZ	Q13574	1117 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	ZNF268	Q14587	947 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	CYP2A13	Q16696	494 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	SNAP47	Q5SQN1	464 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	HECTD3	Q5T447	861 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	RIOX2	Q8IUF8	465 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	SEPHS2	Q99611	448 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538		A0A088AWK7	358 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	FAM25A	B3EWG3	89 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	FAM25C	B3EWG5	89 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	FAM25G	B3EWG6	89 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	ANKRD63	C9JTQ0	380 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	CXCL14	O95715	111 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	HOXC6	P09630	235 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	ZNF10	P21506	573 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	SKIV2L2	P42285	1042 aa	Known RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	RGMB	Q6NW40	437 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	NAT16	Q8N8M0	369 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	GPR152	Q8TDT2	470 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	LRRC4B	Q9NT99	713 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.29	□□□□□ -0.28	4e-6	■■■■■ 27.9
NUMA1-233	ENST00000616538	PIK3CD	O00329	1044 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	HS6ST1	O60243	411 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	DSG1	Q02413	1049 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	CRY1	Q16526	586 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	TMEM26	Q6ZUK4	368 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	POLR1E	Q9GZS1	481 aa	Known RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	NMRAL1	Q9HBL8	299 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	GPN3	Q9UHW5	284 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	MCM8	Q9UJA3	840 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	DLGAP3	O95886	979 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	PABPC1	P11940	636 aa	Known RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	NUP62	P37198	522 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	SNRPD1	P62314	119 aa	Known RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	CCNG2	Q16589	344 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	SDHAF4	Q5VUM1	108 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	TRAF7	Q6Q0C0	670 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	TRIT1	Q9H3H1	467 aa	Known RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	ARL15	Q9NXU5	204 aa		13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	MORC2	Q9Y6X9	1032 aa	Predicted RBP	13.29	□□□□□ -0.28
NUMA1-233	ENST00000616538	PRKAR2A	P13861	404 aa	Known RBP	13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	NR2C2	P49116	596 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	NPY2R	P49146	381 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	SKP1	P63208	163 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	SEC23A	Q15436	765 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	SEPT3	Q9UH03	358 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	NRXN1	Q9ULB1	1477 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	PRKAG1	P54619	331 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	TTI2	Q6NXR4	508 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	CCDC103	Q8IW40	242 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	OR56A4	Q8NGH8	313 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	HGH1	Q9BTY7	390 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	PABPC3	Q9H361	631 aa	Known RBP	13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	KBTBD4	Q9NVX7	518 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	HMGCR	P04035	888 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	UBA1	P22314	1058 aa	Known RBP	13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	CD52	P31358	61 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	MCL1	Q07820	350 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	GNA13	Q14344	377 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	APOBEC3H	Q6NTF7	200 aa	Known RBP	13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	DSEL	Q8IZU8	1212 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	ACTL9	Q8TC94	416 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	FERD3L	Q96RJ6	166 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	TRHDE	Q9UKU6	1024 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	DUSP12	Q9UNI6	340 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538		A0A1B0GW55	424 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	C1QTNF3-AMACR	E9PGA6	284 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	DUX4L2	P0CJ85	424 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	DUX4L3	P0CJ86	424 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	DUX4L4	P0CJ87	422 aa		13.28	□□□□□ -0.28
NUMA1-233	ENST00000616538	DUX4L5	P0CJ88	424 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms