RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 MS4A13Q5J8X5 152 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 CCNI2Q6ZMN8 369 aaPredicted RBP19.62■□□□□ 0.73
CDX1-202ENST00000616154 C11orf57Q6ZUT1 292 aaPredicted RBP19.62■□□□□ 0.73
CDX1-202ENST00000616154 USP30Q70CQ3 517 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 PROSER1Q86XN7 944 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 KDM1BQ8NB78 822 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 MYEOVQ96EZ4 313 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 CDC6Q99741 560 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 BPIFA3Q9BQP9 254 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 SLC4A5Q9BY07 1137 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 PABPC3Q9H361 631 aaKnown RBP19.62■□□□□ 0.73
CDX1-202ENST00000616154 INTS6Q9UL03 887 aaKnown RBP19.62■□□□□ 0.73
CDX1-202ENST00000616154 SCML1Q9UN30 329 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 SNX11Q9Y5W9 270 aa19.62■□□□□ 0.73
CDX1-202ENST00000616154 TAF4O00268 1085 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 FSBPO95073 299 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 GNA15P30679 374 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 ACADSBP45954 432 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 ST8SIA6P61647 398 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 SCAPQ12770 1279 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 ARID5BQ14865 1188 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 SUZ12Q15022 739 aaKnown RBP19.61■□□□□ 0.73
CDX1-202ENST00000616154 HNRNPA1L2Q32P51 320 aaKnown RBP19.61■□□□□ 0.73
CDX1-202ENST00000616154 ANO6Q4KMQ2 910 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 CDKAL1Q5VV42 579 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 TMEM110Q86TL2 294 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 SCUBE3Q8IX30 993 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 MRGPRX3Q96LB0 322 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 ORAI3Q9BRQ5 295 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 TRIM62Q9BVG3 475 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 NUCKS1Q9H1E3 243 aaKnown RBP19.61■□□□□ 0.73
CDX1-202ENST00000616154 MTG2Q9H4K7 406 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 SAMSN1Q9NSI8 373 aaKnown RBP19.61■□□□□ 0.73
CDX1-202ENST00000616154 AJAP1Q9UKB5 411 aaPredicted RBP19.61■□□□□ 0.73
CDX1-202ENST00000616154 NAALADL1Q9UQQ1 740 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 NCKAP1Q9Y2A7 1128 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 ANKRD6Q9Y2G4 727 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 ATRXP46100 2492 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 LAMA5O15230 3695 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 ACACAQ13085 2346 aa19.61■□□□□ 0.73
CDX1-202ENST00000616154 SIN3BO75182 1162 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 DKK1O94907 266 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 CDH18Q13634 790 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 KCNJ12Q14500 433 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 TCP11X2Q5H9J9 407 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 TAC4Q86UU9 113 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 CREBRFQ8IUR6 639 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 CCDC117Q8IWD4 279 aaPredicted RBP19.6■□□□□ 0.73
CDX1-202ENST00000616154 CARNMT1Q8N4J0 409 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 ADAM32Q8TC27 787 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 RHBDD1Q8TEB9 315 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 IGSF8Q969P0 613 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 FAM149B1Q96BN6 582 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 ACP6Q9NPH0 428 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 ST7Q9NRC1 585 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 TOR4AQ9NXH8 423 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 CYTH4Q9UIA0 394 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 PCDHGC3Q9UN70 934 aa19.6■□□□□ 0.73
CDX1-202ENST00000616154 ITPR1Q14643 2758 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 APC2O95996 2303 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 RNASEH1O60930 286 aaKnown RBP19.59■□□□□ 0.73
CDX1-202ENST00000616154 LUC7L3O95232 432 aaKnown RBP19.59■□□□□ 0.73
CDX1-202ENST00000616154 IGHV4-34P06331 123 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 SRPRAP08240 638 aaKnown RBP19.59■□□□□ 0.73
CDX1-202ENST00000616154 KCNMA1Q12791 1236 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 SFSWAPQ12872 951 aaKnown RBP19.59■□□□□ 0.73
CDX1-202ENST00000616154 DCAF6Q58WW2 860 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 FSCBQ5H9T9 825 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 PITRM1Q5JRX3 1037 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 KIAA0895LQ68EN5 471 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 DHX40Q8IX18 779 aaKnown RBP19.59■□□□□ 0.73
CDX1-202ENST00000616154 FAM71AQ8IYT1 594 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 TSPY26PQ9H489 355 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 FBXL12Q9NXK8 326 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 DNAJC12Q9UKB3 198 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 ERVW-1Q9UQF0 538 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 BTBD3Q9Y2F9 522 aa19.59■□□□□ 0.73
CDX1-202ENST00000616154 GOLGA4Q13439 2230 aaKnown RBP19.59■□□□□ 0.73
CDX1-202ENST00000616154 ITIH6Q6UXX5 1313 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 TARSL2A2RTX5 802 aaKnown RBP19.58■□□□□ 0.73
CDX1-202ENST00000616154 THAP12O43422 761 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 PCDHGA12O60330 932 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 MOCS2O96007 188 aaPredicted RBP19.58■□□□□ 0.73
CDX1-202ENST00000616154 APOEP02649 317 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 ATXN1LP0C7T5 689 aaKnown RBP19.58■□□□□ 0.73
CDX1-202ENST00000616154 CTSKP43235 329 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 CCT8P50990 548 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 CST6Q15828 149 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 ARHGAP44Q17R89 818 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 C9orf64Q5T6V5 341 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 SYPL2Q5VXT5 272 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 LAYNQ6UX15 382 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 MMS22LQ6ZRQ5 1243 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 CFAP52Q8N1V2 620 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 GANCQ8TET4 914 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 NAA15Q9BXJ9 866 aaKnown RBP19.58■□□□□ 0.73
CDX1-202ENST00000616154 NAT10Q9H0A0 1025 aaKnown RBP19.58■□□□□ 0.73
CDX1-202ENST00000616154 SERGEFQ9UGK8 458 aa19.58■□□□□ 0.73
CDX1-202ENST00000616154 ADAMTS20P59510 1910 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms