RNA–Protein interactions for RNA: ENST00000613394.4

HPS1-215, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS1, Length 3,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-215ENST00000613394 COPG2Q9UBF2 871 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 CACNG4Q9UBN1 327 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 ZNF180Q9UJW8 692 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 TRIM13O60858 407 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 PFDN1O60925 122 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 FGFR3P22607 806 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 L1CAMP32004 1257 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 NDUFV1P49821 464 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 TMEM198Q66K66 360 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 FRMD7Q6ZUT3 714 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 ARCQ7LC44 396 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 UBR7Q8N806 425 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 HIC2Q96JB3 615 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 OLFM3Q96PB7 478 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 NMRAL1Q9HBL8 299 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 ATAD5Q96QE3 1844 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 DYNC1LI2O43237 492 aaPredicted RBP14.13□□□□□ -0.15
HPS1-215ENST00000613394 RECQL4O94761 1208 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 SEC24DO94855 1032 aaPredicted RBP14.13□□□□□ -0.15
HPS1-215ENST00000613394 CHRNGP07510 517 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 CCNG1P51959 295 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 GRM1Q13255 1194 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 NRF1Q16656 503 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 FBXO47Q5MNV8 452 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 PPM1LQ5SGD2 360 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 PHC3Q8NDX5 983 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 VPS33BQ9H267 617 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 NXF3Q9H4D5 531 aaKnown RBP14.13□□□□□ -0.15
HPS1-215ENST00000613394 FAM96AQ9H5X1 160 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 PLEKHA5Q9HAU0 1116 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 SNX10Q9Y5X0 201 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 WNK3Q9BYP7 1800 aa14.13□□□□□ -0.15
HPS1-215ENST00000613394 BIRC5O15392 142 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 CSPG5O95196 566 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 ALDOAP04075 364 aaKnown RBP14.12□□□□□ -0.15
HPS1-215ENST00000613394 IL4RP24394 825 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 PMLP29590 882 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 SERPINB8P50452 374 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 DLG1Q12959 904 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 RPS6KA2Q15349 733 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 SFT2D3Q587I9 215 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 SEL1L3Q68CR1 1132 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 TTC39CQ8N584 583 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 TLE6Q9H808 572 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 EPS15L1Q9UBC2 864 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 POMPQ9Y244 141 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 ANKRD12Q6UB98 2062 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 TK2O00142 265 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 C2P06681 752 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 PRKCHP24723 683 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 PDK3Q15120 406 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 SLC9B1Q4ZJI4 515 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 ZNF618Q5T7W0 954 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 CYP2R1Q6VVX0 501 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 KCNMB4Q86W47 210 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 PLD6Q8N2A8 252 aaKnown RBP14.12□□□□□ -0.15
HPS1-215ENST00000613394 ZNF276Q8N554 614 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 OR6P1Q8NGX9 317 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 RCN3Q96D15 328 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 ELMO2Q96JJ3 720 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 PRPF18Q99633 342 aaKnown RBP14.12□□□□□ -0.15
HPS1-215ENST00000613394 GRIP2Q9C0E4 1043 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 CHRAC1Q9NRG0 131 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 IRAK4Q9NWZ3 460 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 BCAP29Q9UHQ4 241 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 F8W8V4 182 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 CNTFP26441 200 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 TKTL1P51854 596 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 GHRHRQ02643 423 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 KLF10Q13118 480 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 OLFML1Q6UWY5 402 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 BNC2Q6ZN30 1099 aaPredicted RBP14.12□□□□□ -0.15
HPS1-215ENST00000613394 TNIP3Q96KP6 325 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 OR52B2Q96RD2 323 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 FSD1LQ9BXM9 530 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 EIF2AQ9BY44 585 aaKnown RBP14.12□□□□□ -0.15
HPS1-215ENST00000613394 SUDS3Q9H7L9 328 aaPredicted RBP14.12□□□□□ -0.15
HPS1-215ENST00000613394 ARHGEF4Q9NR80 690 aa14.12□□□□□ -0.15
HPS1-215ENST00000613394 FAM159BA6NKW6 160 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 RNASEH1O60930 286 aaKnown RBP14.11□□□□□ -0.15
HPS1-215ENST00000613394 VAPBO95292 243 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 VAV1P15498 845 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 VCLP18206 1134 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 TSPAN8P19075 237 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 NR2C2P49116 596 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 CCNA1P78396 465 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 TMED1Q13445 227 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 LAMB3Q13751 1172 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 CYLC2Q14093 348 aaPredicted RBP14.11□□□□□ -0.15
HPS1-215ENST00000613394 ZNF460Q14592 562 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 CWF19L1Q69YN2 538 aaKnown RBP14.11□□□□□ -0.15
HPS1-215ENST00000613394 KYQ8NBH2 561 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 URGCPQ8TCY9 931 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 KCTD4Q8WVF5 259 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 CXCL16Q9H2A7 254 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 NUDT5Q9UKK9 219 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 MYOCOSA0A1B0GUC4 107 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 STX16-NPEPL1H3BU86 382 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 NFKBIEO00221 500 aa14.11□□□□□ -0.15
HPS1-215ENST00000613394 CLPTM1O96005 669 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms