RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 CYP26B1Q9NR63 512 aa11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 DNAAF2Q9NVR5 837 aaKnown RBP11.04□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CYP1A2P05177 515 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CKBP12277 381 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 RGS4P49798 205 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NR0B1P51843 470 aaKnown RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SUPT20HL1Q3ZLR7 823 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SMUG1Q53HV7 270 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NOA1Q8NC60 698 aaKnown RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 BEST2Q8NFU1 509 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NEDD1Q8NHV4 660 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SNF8Q96H20 258 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HIST1H2AAQ96QV6 131 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 UBP1Q9NZI7 540 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PLEKHG1Q9ULL1 1385 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 C2orf74A8MZ97 194 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CYB5AP00167 134 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FCER1AP12319 257 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GPC3P51654 580 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 EIF3BP55884 814 aaKnown RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 COPZ1P61923 177 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MYBPC3Q14896 1274 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZC2HC1CQ53FD0 456 aaPredicted RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PGM2L1Q6PCE3 622 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF563Q8TA94 476 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 EEF1AKMT1Q8WVE0 214 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MARCH7Q9H992 704 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 WDR41Q9HAD4 459 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PLEKHA3Q9HB20 300 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 LOC102724200A0A096LPH7 203 aaPredicted RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 METTL21EPA6NDL7 271 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 EFCAB10A6NFE3 127 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PGRMC1O00264 195 aaKnown RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 RIPK2O43353 540 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 THP07101 528 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SLC2A1P11166 492 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PTPRAP18433 802 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MAGEA3P43357 314 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 UAP1L1Q3KQV9 507 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 S100PBPQ96BU1 408 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF649Q9BS31 505 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 COL4A3BPQ9Y5P4 624 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TEX51A0A1B0GUA7 166 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GLP2RO95838 553 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TSPAN19P0C672 248 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SLC1A2P43004 574 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HARS2P49590 506 aaKnown RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TPI1P60174 286 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TGM3Q08188 693 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 AOC3Q16853 763 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CYP2R1Q6VVX0 501 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF550Q7Z398 422 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZC3H7AQ8IWR0 971 aaKnown RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SH2D3CQ8N5H7 860 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 BORCS8Q96FH0 119 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 C17orf62Q9BQA9 187 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HPF1Q9NWY4 346 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ELOVL2Q9NXB9 296 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PCDH10Q9P2E7 1040 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 M0QYV0 167 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PALMO75781 387 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 BMP10O95393 424 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 HECTD3Q5T447 861 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SLFN13Q68D06 897 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PARP8Q8N3A8 854 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 MTMR8Q96EF0 704 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PBRM1Q86U86 1689 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CHN2P52757 468 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 USP14P54578 494 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SCN1BQ07699 218 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PTPRN2Q92932 1015 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GRIP2Q9C0E4 1043 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PCDH12Q9NPG4 1184 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 FAM105AQ9NUU6 356 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 OR10H1Q9Y4A9 318 aa11.03□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TULP4Q9NRJ4 1543 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 IQSEC2Q5JU85 1478 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TCF7P36402 384 aaPredicted RBP11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 KCNB1Q14721 858 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 EZH2Q15910 746 aaKnown RBP11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PYDC2Q56P42 97 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 KIAA1324Q6UXG2 1013 aaKnown RBP11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SMIM5Q71RC9 77 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PRUNE1Q86TP1 453 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZNF471Q9BX82 626 aaPredicted RBP11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CKLFQ9UBR5 152 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SNX24Q9Y343 169 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 SF3B1O75533 1304 aaKnown RBP eCLIP11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 PLA2G4AP47712 749 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 TAF6P49848 677 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 CDH13P55290 713 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 NKAPLQ5M9Q1 402 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 IZUMO3Q5VZ72 239 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 GALNT11Q8NCW6 608 aa11.02□□□□□ -0.64
CNTNAP3B-211ENST00000612828 RCN3Q96D15 328 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms