RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 GBA3Q9H227 469 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 LHX5Q9H2C1 402 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 ARMCX1Q9P291 453 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 LZTS1Q9Y250 596 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 A0A1W2PQ67 120 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 F8W8V4 182 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 GABBR2O75899 941 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 PEX2P28328 305 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 CHRNA3P32297 505 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 RPA3P35244 121 aaPredicted RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 VCPP55072 806 aaKnown RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 PTK7Q13308 1070 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 SPARCL1Q14515 664 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 TRIP13Q15645 432 aaPredicted RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 TRIM71Q2Q1W2 868 aaKnown RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 C15orf59Q2T9L4 293 aaPredicted RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 FAM183BPQ6ZVS7 135 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 RTN4RL1Q86UN2 441 aaPredicted RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
RTN1-209ENST00000611068 PYDC1Q8WXC3 89 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 ADAM33Q9BZ11 813 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 ZNF518BQ9C0D4 1074 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 PCYOX1Q9UHG3 505 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 IP6K2Q9UHH9 426 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 LGALS13Q9UHV8 139 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 COQ6Q9Y2Z9 468 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 RBMX2Q9Y388 322 aaKnown RBP16.38■□□□□ 0.21
RTN1-209ENST00000611068 NEU2Q9Y3R4 380 aa16.38■□□□□ 0.21
RTN1-209ENST00000611068 NDC80O14777 642 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 TKTP29401 623 aaKnown RBP16.37■□□□□ 0.21
RTN1-209ENST00000611068 BRCC3P46736 316 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ARPC4P59998 168 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ACTR3P61158 418 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ANKRD20A4Q4UJ75 823 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 KIAA0319Q5VV43 1072 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ELMSAN1Q6PJG2 1045 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 LCLAT1Q6UWP7 414 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 PACS1Q6VY07 963 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 RGS9BPQ6ZS82 235 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 CCDC105Q8IYK2 499 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 C4orf33Q8N1A6 199 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ARFGAP1Q8N6T3 406 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 GFM2Q969S9 779 aaKnown RBP16.37■□□□□ 0.21
RTN1-209ENST00000611068 CCT7Q99832 543 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 NDEL1Q9GZM8 345 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 B3GAT3O94766 335 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ITGB1P05556 798 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 CTNNA2P26232 953 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 TRNP1Q6NT89 227 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 CTU1Q7Z7A3 348 aaKnown RBP16.37■□□□□ 0.21
RTN1-209ENST00000611068 ZNF560Q96MR9 790 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 MRPL1Q9BYD6 325 aaKnown RBP16.37■□□□□ 0.21
RTN1-209ENST00000611068 RHOBTB2Q9BYZ6 727 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 CHST7Q9NS84 486 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ADAMTS6Q9UKP5 1117 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 ITM2BQ9Y287 266 aa16.37■□□□□ 0.21
RTN1-209ENST00000611068 CASP8AP2Q9UKL3 1982 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 WDR91A4D1P6 747 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 H3BRJ5 948 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 PQBP1O60828 265 aaKnown RBP16.36■□□□□ 0.21
RTN1-209ENST00000611068 BEST1O76090 585 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 FUCA1P04066 466 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 IL1R2P27930 398 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 NKX3-2P78367 333 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 DMPKQ09013 629 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 SV2CQ496J9 727 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 RHOT1Q8IXI2 618 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 ZNF75CPQ92670 426 aaPredicted RBP16.36■□□□□ 0.21
RTN1-209ENST00000611068 SENP8Q96LD8 212 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 CFAP57Q96MR6 1250 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.36■□□□□ 0.21
RTN1-209ENST00000611068 RSAD1Q9HA92 442 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 NINJ2Q9NZG7 142 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 SAE1Q9UBE0 346 aaPredicted RBP16.36■□□□□ 0.21
RTN1-209ENST00000611068 SLC7A8Q9UHI5 535 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.36■□□□□ 0.21
RTN1-209ENST00000611068 GPC6Q9Y625 555 aaPredicted RBP16.36■□□□□ 0.21
RTN1-209ENST00000611068 B2RBV5 119 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 AP1G1O43747 822 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 CDH16O75309 829 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 STAU1O95793 577 aaKnown RBP16.36■□□□□ 0.21
RTN1-209ENST00000611068 ZBED1O96006 694 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 DYNLT1P63172 113 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 CCDC153Q494R4 210 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 C1orf146Q5VVC0 180 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 SLAIN1Q8ND83 568 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 FAM172AQ8WUF8 416 aa16.36■□□□□ 0.21
RTN1-209ENST00000611068 TMA7Q9Y2S6 64 aaKnown RBP16.36■□□□□ 0.21
RTN1-209ENST00000611068 KRT1P04264 644 aa16.35■□□□□ 0.21
RTN1-209ENST00000611068 TFE3P19532 575 aaPredicted RBP16.35■□□□□ 0.21
RTN1-209ENST00000611068 FOLH1Q04609 750 aa16.35■□□□□ 0.21
RTN1-209ENST00000611068 ZBTB16Q05516 673 aa16.35■□□□□ 0.21
RTN1-209ENST00000611068 CALCOCO2Q13137 446 aa16.35■□□□□ 0.21
RTN1-209ENST00000611068 TLR1Q15399 786 aa16.35■□□□□ 0.21
RTN1-209ENST00000611068 MDH1BQ5I0G3 518 aa16.35■□□□□ 0.21
RTN1-209ENST00000611068 NET1Q7Z628 596 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms