RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 FAM160A2Q8N612 972 aaPredicted RBP17.25■□□□□ 0.35
SSBP4-204ENST00000597724 FAM172AQ8WUF8 416 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 ERLEC1Q96DZ1 483 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 MCEEQ96PE7 176 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 NCDNQ9UBB6 729 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 SNX10Q9Y5X0 201 aa17.25■□□□□ 0.35
SSBP4-204ENST00000597724 SDK1Q7Z5N4 2213 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 IGLV3-10A0A075B6K4 115 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 ZBTB24O43167 697 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 SYNCRIPO60506 623 aaKnown RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 CLDN11O75508 207 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 MOCS3O95396 460 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 ASLP04424 464 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 EPHX1P07099 455 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 RETP07949 1114 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 NDUFV2P19404 249 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 ADRA1BP35368 520 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 ZNF143P52747 638 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 CDH4P55283 916 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 OXCT1P55809 520 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 HDAC4P56524 1084 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 MAMLD1Q13495 774 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 PLEKHG6Q3KR16 790 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 PLK5Q496M5 336 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 FNDC3BQ53EP0 1204 aaKnown RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 TDRD12Q587J7 1177 aaKnown RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 SPECC1LQ69YQ0 1117 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 PLEKHA7Q6IQ23 1121 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 CXorf57Q6NSI4 855 aaKnown RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 LRRC31Q6UY01 552 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 DNAAF5Q86Y56 855 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 APCDD1Q8J025 514 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 RLN3Q8WXF3 142 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 MYO19Q96H55 970 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 MRGPRX1Q96LB2 322 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 ISCUQ9H1K1 167 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 DUSP15Q9H1R2 295 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 PARVAQ9NVD7 372 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 ADAMTS1Q9UHI8 967 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 TBC1D30Q9Y2I9 924 aa17.24■□□□□ 0.35
SSBP4-204ENST00000597724 MUC22E2RYF6 1773 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-204ENST00000597724 CKAP5Q14008 2032 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 DMXL1Q9Y485 3027 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.23■□□□□ 0.35
SSBP4-204ENST00000597724 E9PAM4 449 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 CNTN5O94779 1100 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 PLEKP08567 350 aaPredicted RBP17.23■□□□□ 0.35
SSBP4-204ENST00000597724 HLA-EP13747 358 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 MZF1P28698 734 aaPredicted RBP17.23■□□□□ 0.35
SSBP4-204ENST00000597724 HNRNPH3P31942 346 aaKnown RBP17.23■□□□□ 0.35
SSBP4-204ENST00000597724 PLK1P53350 603 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 ZNF177Q13360 481 aaPredicted RBP17.23■□□□□ 0.35
SSBP4-204ENST00000597724 BYSLQ13895 437 aaKnown RBP17.23■□□□□ 0.35
SSBP4-204ENST00000597724 MAP7D1Q3KQU3 841 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 ARL13BQ3SXY8 428 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 ALFQ53S48 1182 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 DCUN1D2Q6PH85 259 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 C11orf74Q86VG3 221 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 VSTM4Q8IW00 320 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 KDM1BQ8NB78 822 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 ALG14Q96F25 216 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 MRGPRX3Q96LB0 322 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 HINFPQ9BQA5 517 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 CNPY3Q9BT09 278 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 SLC6A17Q9H1V8 727 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 GMEB2Q9UKD1 530 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 ABCA7Q8IZY2 2146 aa17.23■□□□□ 0.35
SSBP4-204ENST00000597724 PLXND1Q9Y4D7 1925 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 CCP110O43303 1012 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 ATMINO43313 823 aaPredicted RBP17.22■□□□□ 0.35
SSBP4-204ENST00000597724 SRGAP2O75044 1071 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 BCKDHBP21953 392 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 CTSOP43234 321 aaPredicted RBP17.22■□□□□ 0.35
SSBP4-204ENST00000597724 ECT2LQ008S8 904 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 CAMK2GQ13555 558 aaPredicted RBP17.22■□□□□ 0.35
SSBP4-204ENST00000597724 TRIM14Q14142 442 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 METTL3Q86U44 580 aaKnown RBP17.22■□□□□ 0.35
SSBP4-204ENST00000597724 FRMD1Q8N878 549 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 OR52K2Q8NGK3 314 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 NTAN1Q96AB6 310 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 LOXL4Q96JB6 756 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 SPACA7Q96KW9 195 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 FEM1AQ9BSK4 669 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 MKRN2Q9H000 416 aaKnown RBP17.22■□□□□ 0.35
SSBP4-204ENST00000597724 OSBPL2Q9H1P3 480 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 MPP6Q9NZW5 540 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 ARHGAP20Q9P2F6 1191 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 SUN2Q9UH99 717 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 ERVW-1Q9UQF0 538 aa17.22■□□□□ 0.35
SSBP4-204ENST00000597724 DOCK4Q8N1I0 1966 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 ZNF217O75362 1048 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 RHOBTB1O94844 696 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 SRPRAP08240 638 aaKnown RBP17.21■□□□□ 0.35
SSBP4-204ENST00000597724 COPAP53621 1224 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 ST8SIA6P61647 398 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 OGDHQ02218 1023 aa17.21■□□□□ 0.35
SSBP4-204ENST00000597724 NRG1Q02297 640 aaPredicted RBP17.21■□□□□ 0.35
SSBP4-204ENST00000597724 ELF2Q15723 593 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms