RNA–Protein interactions for RNA: ENST00000580074.1

ERBB2-210, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 754 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-210ENST00000580074 ERICH1Q86X53 443 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 CACUL1Q86Y37 369 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 SLC41A1Q8IVJ1 513 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 EPS8L1Q8TE68 723 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 GANCQ8TET4 914 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 DNASE2BQ8WZ79 361 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 SNX19Q92543 992 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 NT5C3BQ969T7 300 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 SKA1Q96BD8 255 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 C18orf8Q96DM3 657 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 ERLEC1Q96DZ1 483 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 CCDC114Q96M63 670 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 RPRD1AQ96P16 312 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-210ENST00000580074 SPAG5Q96R06 1193 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 MIR1-1HGQ9H1L0 117 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 SLC6A17Q9H1V8 727 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 CAPN10Q9HC96 672 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 SLC25A13Q9UJS0 675 aa12.07□□□□□ -0.48
ERBB2-210ENST00000580074 SYNJ2BP-COX16A0A087WUM0 186 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 GOLGA6L7A0A1B0GV03 622 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 SMTNL1A8MU46 457 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 METTL12A8MUP2 240 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 CDX4O14627 284 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 BCAT2O15382 392 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 CLDN11O75508 207 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 SEMA4FO95754 770 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 ADH1BP00325 375 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 SULT1E1P49888 294 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 SGSHP51688 502 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 ECT2LQ008S8 904 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 NME3Q13232 169 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 ARID5BQ14865 1188 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 PTPRNQ16849 979 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 HNRNPA1L2Q32P51 320 aaKnown RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 PTPN20Q4JDL3 420 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 FAM102AQ5T9C2 384 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 SH3PXD2AQ5TCZ1 1133 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 DCAF12L1Q5VU92 463 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 LRRC31Q6UY01 552 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 TRIM72Q6ZMU5 477 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 MINDY1Q8N5J2 469 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 DEFB119Q8N690 84 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 PGAP3Q96FM1 320 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 FUCA2Q9BTY2 467 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 VPS16Q9H269 839 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 PRSS16Q9NQE7 514 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 TMEM74BQ9NUR3 256 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 DNAAF2Q9NVR5 837 aaKnown RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 COX16Q9P0S2 106 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 NOCTQ9UK39 431 aaKnown RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 MYO6Q9UM54 1294 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 FARP1Q9Y4F1 1045 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-210ENST00000580074 ITIH6Q6UXX5 1313 aa12.06□□□□□ -0.48
ERBB2-210ENST00000580074 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 LRRC72A6NJI9 287 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 M0QYT0 321 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 ERBB2P04626 1255 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 CYP1A1P04798 512 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 CCDC172P0C7W6 258 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 PMLP29590 882 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 SOX5P35711 763 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 AFF3P51826 1226 aaKnown RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 KRT83P78385 493 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 SHC2P98077 582 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 CDR2Q01850 454 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 ZNF177Q13360 481 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 ELAVL3Q14576 367 aaKnown RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 INAVAQ3KP66 663 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 N4BP2L1Q5TBK1 243 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 FAM124AQ86V42 546 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 CCAR2Q8N163 923 aaKnown RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 ZCCHC9Q8N567 271 aaKnown RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 WFDC5Q8TCV5 224 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 OMDQ99983 421 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 RSPH9Q9H1X1 276 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-210ENST00000580074 WDCPQ9H6R7 721 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 FZD4Q9ULV1 537 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 ERVW-1Q9UQF0 538 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 PCDHB9Q9Y5E1 797 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 GON4LQ3T8J9 2241 aa12.05□□□□□ -0.48
ERBB2-210ENST00000580074 NYNRINQ9P2P1 1898 aaKnown RBP12.04□□□□□ -0.48
ERBB2-210ENST00000580074 CACNA1EQ15878 2313 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 C1QTNF3-AMACRE9PGA6 284 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 GRAP2O75791 330 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 TRIM16O95361 564 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 CDK11BP21127 795 aaKnown RBP12.04□□□□□ -0.48
ERBB2-210ENST00000580074 STAT1P42224 750 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 PLK1P53350 603 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 CDH4P55283 916 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 GSCP56915 257 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-210ENST00000580074 RPS14P62263 151 aaKnown RBP12.04□□□□□ -0.48
ERBB2-210ENST00000580074 DEUP1Q05D60 604 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 GRIK2Q13002 908 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 SUZ12Q15022 739 aaKnown RBP12.04□□□□□ -0.48
ERBB2-210ENST00000580074 CST6Q15828 149 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 ARL13BQ3SXY8 428 aa12.04□□□□□ -0.48
ERBB2-210ENST00000580074 C5orf22Q49AR2 442 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms