RNA–Protein interactions for RNA: ENST00000579128.1

TYMS-204, Transcript of thymidylate synthetase, humanhuman

TSL 2

Gene TYMS, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-204ENST00000579128 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
TYMS-204ENST00000579128 SAMSN1Q9NSI8 373 aaKnown RBP13.13□□□□□ -0.31
TYMS-204ENST00000579128 LMBRD1Q9NUN5 540 aa13.13□□□□□ -0.31
TYMS-204ENST00000579128 DNAAF2Q9NVR5 837 aaKnown RBP13.13□□□□□ -0.31
TYMS-204ENST00000579128 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.13□□□□□ -0.31
TYMS-204ENST00000579128 PCNX2A6NKB5 2137 aa13.13□□□□□ -0.31
TYMS-204ENST00000579128 ATXN2Q99700 1313 aaKnown RBP13.13□□□□□ -0.31
TYMS-204ENST00000579128 TNRC6BQ9UPQ9 1833 aaKnown RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 SYNJ2BP-COX16A0A087WUM0 186 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 M0QYT0 321 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 CLDN11O75508 207 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 KRT37O76014 449 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 TRIM16O95361 564 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 SEMA4FO95754 770 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 MBD3O95983 291 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 GABRB2P47870 512 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 SGSHP51688 502 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 AFF3P51826 1226 aaKnown RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 PLK1P53350 603 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 RPS14P62263 151 aaKnown RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 ZNF252P-AS1Q0IIN9 211 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 CCDC15Q0P6D6 951 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 SEMA3BQ13214 749 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 NME3Q13232 169 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 SUZ12Q15022 739 aaKnown RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 OLFML1Q6UWY5 402 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 FAM183BPQ6ZVS7 135 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 ARCQ7LC44 396 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 CCAR2Q8N163 923 aaKnown RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 PGAP3Q96FM1 320 aaPredicted RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 LMLNQ96KR4 655 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 RPRD1AQ96P16 312 aaPredicted RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 COX16Q9P0S2 106 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 SLC25A13Q9UJS0 675 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 ERVW-1Q9UQF0 538 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TYMS-204ENST00000579128 PCDHB9Q9Y5E1 797 aa13.12□□□□□ -0.31
TYMS-204ENST00000579128 LRRC72A6NJI9 287 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 DFNA5O60443 496 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 ADH1BP00325 375 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 ERBB2P04626 1255 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 ZNF883P0CG24 379 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
TYMS-204ENST00000579128 CDH4P55283 916 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 KRT83P78385 493 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 KCNMA1Q12791 1236 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 ELAVL3Q14576 367 aaKnown RBP13.11□□□□□ -0.31
TYMS-204ENST00000579128 TAF5Q15542 800 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 SLC25A52Q3SY17 297 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 PTPN20Q4JDL3 420 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 FAM46CQ5VWP2 391 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 FBXL22Q6P050 247 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 TRIM72Q6ZMU5 477 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 FAM124AQ86V42 546 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 WFDC5Q8TCV5 224 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 CCDC114Q96M63 670 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 CNTNAP3BQ96NU0 1288 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 SPAG5Q96R06 1193 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 PRMT1Q99873 361 aaKnown RBP13.11□□□□□ -0.31
TYMS-204ENST00000579128 OMDQ99983 421 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 CNTNAP3Q9BZ76 1288 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
TYMS-204ENST00000579128 FBXL12Q9NXK8 326 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 FZD4Q9ULV1 537 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 ITIH6Q6UXX5 1313 aa13.11□□□□□ -0.31
TYMS-204ENST00000579128 F8VZ95 297 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 SIN3BO75182 1162 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 GRAP2O75791 330 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 C5AR1P21730 350 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 CD27P26842 260 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 MAOBP27338 520 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 RNASE9P60153 205 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 APBA1Q02410 837 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 DEUP1Q05D60 604 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 AUHQ13825 339 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 SYCP1Q15431 976 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 CST6Q15828 149 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 STX1AQ16623 288 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 FSCBQ5H9T9 825 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 FAM102AQ5T9C2 384 aaPredicted RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 RBM43Q6ZSC3 357 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 CACUL1Q86Y37 369 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 ZCCHC9Q8N567 271 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 ZNF366Q8N895 744 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 DEFB124Q8NES8 71 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 SNX19Q92543 992 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 PCMTD1Q96MG8 357 aaPredicted RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 NPY6RQ99463 290 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 C2orf49Q9BVC5 232 aaPredicted RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 NAA15Q9BXJ9 866 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 RETREG1Q9H6L5 497 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 CD93Q9NPY3 652 aa13.1□□□□□ -0.31
TYMS-204ENST00000579128 EIF2B4Q9UI10 523 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 INTS6Q9UL03 887 aaKnown RBP13.1□□□□□ -0.31
TYMS-204ENST00000579128 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms