RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 PGAM4Q8N0Y7 254 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 CPXCR1Q8N123 301 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 DDHD1Q8NEL9 900 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 ACMSDQ8TDX5 336 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 RNF157Q96PX1 679 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 TAAR1Q96RJ0 339 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 IDI2Q9BXS1 227 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 TDRD3Q9H7E2 651 aaKnown RBP14.74□□□□□ -0.05
SMG6-215ENST00000574501 ADA2Q9NZK5 511 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 FBXO40Q9UH90 709 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 CNOT11Q9UKZ1 510 aaKnown RBP14.74□□□□□ -0.05
SMG6-215ENST00000574501 TRIM17Q9Y577 477 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 AP4S1Q9Y587 144 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 CHRNGP07510 517 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 MX2P20592 715 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 MPSTP25325 297 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 TNFSF9P41273 254 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 JAK3P52333 1124 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 ESRRGP62508 458 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 TFDP2Q14188 446 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 BSPRYQ5W0U4 402 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 NXNQ6DKJ4 435 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 RP9Q8TA86 221 aaKnown RBP14.74□□□□□ -0.05
SMG6-215ENST00000574501 FNIP1Q8TF40 1166 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 SLC7A3Q8WY07 619 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 BORCS5Q969J3 196 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 TMEM143Q96AN5 459 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 PGLYRP2Q96PD5 576 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 GPATCH1Q9BRR8 931 aaKnown RBP14.74□□□□□ -0.05
SMG6-215ENST00000574501 PCDHGC3Q9UN70 934 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 TMX2Q9Y320 296 aa14.74□□□□□ -0.05
SMG6-215ENST00000574501 A0A1W2PPW3 197 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 J3QRK9 145 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 GPR25O00155 361 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 PPEF1O14829 653 aaPredicted RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 GIPC1O14908 333 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 WDR46O15213 610 aaKnown RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 GRAP2O75791 330 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 VAPBO95292 243 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 EDN1P05305 212 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 CKMT2P17540 419 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 UGT1A6P19224 532 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 UGT1A1P22309 533 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 UGT1A4P22310 534 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 UGT1A3P35503 534 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 UGT1A5P35504 534 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 PPARGP37231 505 aaPredicted RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 RAP1GAPP47736 663 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 ACADVLP49748 655 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 YWHAEP62258 255 aaKnown RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 STILQ15468 1287 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 FAM47CQ5HY64 1035 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 METTL21CQ5VZV1 264 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 SCYL2Q6P3W7 929 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 CES3Q6UWW8 571 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 CYP4V2Q6ZWL3 525 aaPredicted RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 TRIM50Q86XT4 487 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 FBXL8Q96CD0 374 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 NOL11Q9H8H0 719 aaKnown RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 SEC24DO94855 1032 aaPredicted RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 ATG7O95352 703 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 BMP10O95393 424 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 GNAO1P09471 354 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 IL4RP24394 825 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 GABRB3P28472 473 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 ETFBP38117 255 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 TMED10P49755 219 aaKnown RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 SESN2P58004 480 aaPredicted RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 TUBA4AP68366 448 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 ZNF829Q3KNS6 432 aaPredicted RBP14.73□□□□□ -0.05
SMG6-215ENST00000574501 ZBED5Q49AG3 693 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 FGD3Q5JSP0 725 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 SWSAP1Q6NVH7 229 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 NIPA1Q7RTP0 329 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 ZNF786Q8N393 782 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 MCUQ8NE86 351 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 TBC1D15Q8TC07 691 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 RTP4Q96DX8 246 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 HIPK3Q9H422 1215 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.73□□□□□ -0.05
SMG6-215ENST00000574501 VPS45Q9NRW7 570 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 SPATA7Q9P0W8 599 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 VPS28Q9UK41 221 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 SLC8A2Q9UPR5 921 aa14.73□□□□□ -0.05
SMG6-215ENST00000574501 LRRIQ4A6NIV6 560 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 HTRA2O43464 458 aaPredicted RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 ENDOD1O94919 500 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 GSTT2P0CG29 244 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 GSTT2BP0CG30 244 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 NUMBP49757 651 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 NIPAL4Q0D2K0 466 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 BNIP3Q12983 259 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 CBLBQ13191 982 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 DPYSQ14117 519 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 MTERF2Q49AM1 385 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 FAM102AQ5T9C2 384 aaPredicted RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 GPR107Q5VW38 600 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 RSBN1LQ6PCB5 846 aaPredicted RBP14.72□□□□□ -0.05
SMG6-215ENST00000574501 HACE1Q8IYU2 909 aa14.72□□□□□ -0.05
SMG6-215ENST00000574501 PCDH20Q8N6Y1 951 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms