RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 PRR23BQ6ZRT6 265 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 SND1Q7KZF4 910 aaKnown RBP eCLIP13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 C11orf74Q86VG3 221 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 CIR1Q86X95 450 aaPredicted RBP13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 FAM131BQ86XD5 332 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 APCDD1Q8J025 514 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 OR52K2Q8NGK3 314 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 CYB5D2Q8WUJ1 264 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 HMGB4Q8WW32 186 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 SELENOOQ9BVL4 669 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 SIK2Q9H0K1 926 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 ISCUQ9H1K1 167 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 SEPT11Q9NVA2 429 aaKnown RBP13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 MBD1Q9UIS9 605 aaPredicted RBP13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 SNX10Q9Y5X0 201 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 BZW2Q9Y6E2 419 aaKnown RBP13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 THADAQ6YHU6 1953 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 CHD5Q8TDI0 1954 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 SDK1Q7Z5N4 2213 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 CFAP54Q96N23 3096 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 RALGAPA1Q6GYQ0 2036 aa13.37□□□□□ -0.27
CHRNB1-203ENST00000570557 NUP205Q92621 2012 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 H0Y626 953 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 LRP3O75074 770 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 RTN2O75298 545 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 CLDN11O75508 207 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 EPN2O95208 641 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 ASLP04424 464 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 ATP5BP06576 529 aaKnown RBP13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 GPD1P21695 349 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 BCKDHBP21953 392 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 ADRA1BP35368 520 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 GGCXP38435 758 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 ZNF143P52747 638 aaPredicted RBP13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 OGDHQ02218 1023 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 MAMLD1Q13495 774 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 LPAL2Q16609 132 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 ALFQ53S48 1182 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 PMS2CLQ68D20 193 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 DNAJC24Q6P3W2 148 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 CEP68Q76N32 757 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 FRMD1Q8N878 549 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 RLN3Q8WXF3 142 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 NTAN1Q96AB6 310 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 RPRD1AQ96P16 312 aaPredicted RBP13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 MKRN2Q9H000 416 aaKnown RBP13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 OSBPL2Q9H1P3 480 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 PARD6AQ9NPB6 346 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 RAB23Q9ULC3 237 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 NENFQ9UMX5 172 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 PLA2G4CQ9UP65 541 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 LUC7L2Q9Y383 392 aaKnown RBP13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 CEP192Q8TEP8 1941 aa13.36□□□□□ -0.27
CHRNB1-203ENST00000570557 E9PAM4 449 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 CNTN5O94779 1100 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 IGLV3-19P01714 112 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 FTLP02792 175 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 SERPING1P05155 500 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 SRPRAP08240 638 aaKnown RBP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 PLEKP08567 350 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 HLA-EP13747 358 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 MZF1P28698 734 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 CASP14P31944 242 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 CTSOP43234 321 aaPredicted RBP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 OXCT1P55809 520 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 SCAPQ12770 1279 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 SPDYCQ5MJ68 293 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 PLA2G2CQ5R387 149 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 SERPINA13PQ6UXR4 307 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 DNAAF5Q86Y56 855 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 VSTM4Q8IW00 320 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 DRC7Q8IY82 874 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 FAM172AQ8WUF8 416 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 MCEEQ96PE7 176 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 FEM1AQ9BSK4 669 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 MAGEB5Q9BZ81 275 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 SLC6A17Q9H1V8 727 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 PRSS16Q9NQE7 514 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 USP36Q9P275 1121 aaKnown RBP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 BCCIPQ9P287 314 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 NCDNQ9UBB6 729 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 PPARGC1AQ9UBK2 798 aaKnown RBP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 GMEB2Q9UKD1 530 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 NEU3Q9UQ49 428 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 ERVW-1Q9UQF0 538 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 INVSQ9Y283 1065 aa13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHRNB1-203ENST00000570557 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 IGHV1OR15-9A0A0B4J2B8 117 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 TMEM191CA6NGB0 347 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 TMCO5BA8MYB1 307 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 AP5Z1O43299 807 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 CCP110O43303 1012 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 CBFA2T2O43439 604 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 ZNF217O75362 1048 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 TPM3P06753 285 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 EPHX1P07099 455 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 ECT2LQ008S8 904 aa13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 ZNF177Q13360 481 aaPredicted RBP13.34□□□□□ -0.27
CHRNB1-203ENST00000570557 BYSLQ13895 437 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms