RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 FAM131BQ86XD5 332 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 DCLK2Q8N568 766 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 FAM160A2Q8N612 972 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 RNF214Q8ND24 703 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 LOXL4Q96JB6 756 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 PPP1R9BQ96SB3 815 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 DUSP15Q9H1R2 295 aaPredicted RBP14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 TMEM245Q9H330 911 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 TAS2R14Q9NYV8 317 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 INTS6Q9UL03 887 aaKnown RBP14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 INVSQ9Y283 1065 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 CHD5Q8TDI0 1954 aa14.25□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 DDX3XO00571 662 aaKnown RBP eCLIP14.24□□□□□ -0.133e-18■■■■□ 26.5
HERPUD1-218ENST00000569569 DCLK1O15075 740 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 RTN2O75298 545 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 CLDN11O75508 207 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 RHOBTB1O94844 696 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 FTLP02792 175 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 GYPCP04921 128 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 EPHX1P07099 455 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 NDUFV2P19404 249 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 PRKCHP24723 683 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 GGCXP38435 758 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 P2RY2P41231 377 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 CSKP41240 450 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 PLK1P53350 603 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 CDH4P55283 916 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF177Q13360 481 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 ELF2Q15723 593 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 PTPRNQ16849 979 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 PLEKHG6Q3KR16 790 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 ARL13BQ3SXY8 428 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 PLK5Q496M5 336 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 FNDC3BQ53EP0 1204 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 PITRM1Q5JRX3 1037 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 PPP1R15BQ5SWA1 713 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 SH3PXD2AQ5TCZ1 1133 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 HGSNATQ68CP4 663 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 DCUN1D2Q6PH85 259 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 CIR1Q86X95 450 aaPredicted RBP14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 GPR161Q8N6U8 529 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 FAM172AQ8WUF8 416 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 RLN3Q8WXF3 142 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 ERLEC1Q96DZ1 483 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 SPACA7Q96KW9 195 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 MRGPRX1Q96LB2 322 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 TMPRSS4Q9NRS4 437 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 SUN2Q9UH99 717 aa14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 NYNRINQ9P2P1 1898 aaKnown RBP14.24□□□□□ -0.13
HERPUD1-218ENST00000569569 TNRC6BQ9UPQ9 1833 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 DRGXA6NNA5 263 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF217O75362 1048 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 SERPING1P05155 500 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 SRPRAP08240 638 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 HLA-EP13747 358 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 CASP14P31944 242 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 ADRA1BP35368 520 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF143P52747 638 aaPredicted RBP14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 ST8SIA6P61647 398 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 RPL7AP62424 266 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 SULT2A1Q06520 285 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 MAP7D1Q3KQU3 841 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 RAB6CQ53S08 254 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 TDRD12Q587J7 1177 aaKnown RBP14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 PLEKHA7Q6IQ23 1121 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 VPS36Q86VN1 386 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 TMPRSS6Q8IU80 811 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 ZNF683Q8IZ20 524 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 APCDD1Q8J025 514 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 KDM1BQ8NB78 822 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 MCEEQ96PE7 176 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 RAB6CQ9H0N0 254 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 PRDM16Q9HAZ2 1276 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 PARVAQ9NVD7 372 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 TBC1D30Q9Y2I9 924 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 SNX10Q9Y5X0 201 aa14.23□□□□□ -0.13
HERPUD1-218ENST00000569569 CFAP54Q96N23 3096 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 IGLV3-10A0A075B6K4 115 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 E9PAM4 449 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 MAP3K13O43283 966 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 SRGAP2O75044 1071 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 LRP3O75074 770 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 CNTN5O94779 1100 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 DESP17661 470 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 BCKDHBP21953 392 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 MZF1P28698 734 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 IRAK1P51617 712 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 HDAC4P56524 1084 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 ECT2LQ008S8 904 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 MAMLD1Q13495 774 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 CAMK2GQ13555 558 aaPredicted RBP14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 TRIM14Q14142 442 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 NUMA1Q14980 2115 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 ALFQ53S48 1182 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 PMS2CLQ68D20 193 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 SPECC1LQ69YQ0 1117 aa14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 CXorf57Q6NSI4 855 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 METTL3Q86U44 580 aaKnown RBP14.22□□□□□ -0.13
HERPUD1-218ENST00000569569 TRIM11Q96F44 468 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms