RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 C12orf56Q8IXR9 622 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 AFAP1L2Q8N4X5 818 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 ACTRT1Q8TDG2 376 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 MORC4Q8TE76 937 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 GAB3Q8WWW8 586 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 HPS3Q969F9 1004 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 LENG9Q96B70 501 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 TRIM43Q96BQ3 446 aaPredicted RBP5.62□□□□□ -1.51
CAPN3-217ENST00000567817 LRRC45Q96CN5 670 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 FAM81BQ96LP2 452 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 RUNDC3BQ96NL0 473 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 SH3GL2Q99962 352 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 HSD17B14Q9BPX1 270 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 TCF25Q9BQ70 676 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 REEP2Q9BRK0 252 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 GANQ9H2C0 597 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 RANBP17Q9H2T7 1088 aaKnown RBP5.62□□□□□ -1.51
CAPN3-217ENST00000567817 ZHX3Q9H4I2 956 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 SLITRK6Q9H5Y7 841 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 DNAJC18Q9H819 358 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 GDF3Q9NR23 364 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 SLC5A4Q9NY91 659 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 TMOD4Q9NZQ9 345 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 HDAC6Q9UBN7 1215 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 FEM1BQ9UK73 627 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 USP18Q9UMW8 372 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 FRMD4BQ9Y2L6 1034 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 FRMPD4Q14CM0 1322 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 MROH7Q68CQ1 1323 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 PHIPQ8WWQ0 1821 aa5.62□□□□□ -1.51
CAPN3-217ENST00000567817 IGLV3-22A0A075B6J6 115 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 GOLGA6L10A0A0M3HER8 536 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 GOLGA6CA6NDK9 693 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 ERICH4A6NGS2 130 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 DDTLA6NHG4 134 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 GOLGA6L10A6NI86 522 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 LRRIQ3A6PVS8 624 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CAPN14A8MX76 684 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 FAM86B1E9PN63 330 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 NRP1O14786 923 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 EPHB6O15197 1021 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 DKC1O60832 514 aaKnown RBP eCLIP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 SRGAP2O75044 1071 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 PALMO75781 387 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 PSMD10O75832 226 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 ASNSP08243 561 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 PLEKP08567 350 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 FAM86B2P0C5J1 330 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 GOLGA6DP0CG33 693 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CYBAP13498 195 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CPEP16870 476 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 PON1P27169 355 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CNGA1P29973 690 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 ID4P47928 161 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 HMGCS2P54868 508 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 NRG3P56975 720 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 TLE2Q04725 743 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 SLC20A2Q08357 652 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 TCP10Q12799 353 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CEP55Q53EZ4 464 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CFAP58Q5T655 872 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 EMC10Q5UCC4 262 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 LRCH2Q5VUJ6 765 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 RINT1Q6NUQ1 792 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 ALKBH5Q6P6C2 394 aaKnown RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 LRIG3Q6UXM1 1119 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 RNF207Q6ZRF8 634 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 MAATS1Q7Z4T9 603 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 STRA8Q7Z7C7 330 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 SFR1Q86XK3 245 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 GLB1L2Q8IW92 636 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CD302Q8IX05 232 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 NELFCDQ8IXH7 590 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 ANKRD35Q8N283 1001 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 ARFGAP2Q8N6H7 521 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 UBR7Q8N806 425 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 PIK3C3Q8NEB9 887 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 RDM1Q8NG50 284 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 CCDC26Q8TAB7 109 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 SLC35C1Q96A29 364 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 EEF2KMTQ96G04 330 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 INPP4AQ96PE3 977 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 EIF2AK1Q9BQI3 630 aaKnown RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 TEKT3Q9BXF9 490 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 TLR10Q9BXR5 811 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 STK33Q9BYT3 514 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 FAM129AQ9BZQ8 928 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 BHMT2Q9H2M3 363 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 ST6GALNAC4Q9H4F1 302 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 VCPKMTQ9H867 229 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 FAM204AQ9H8W3 233 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 MLXIPQ9HAP2 919 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 NLRC4Q9NPP4 1024 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 AURKAIP1Q9NWT8 199 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 GOLGA6AQ9NYA3 693 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 LARSQ9P2J5 1176 aaKnown RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 SUCLA2Q9P2R7 463 aaPredicted RBP5.61□□□□□ -1.51
CAPN3-217ENST00000567817 TCEAL9Q9UHQ7 104 aa5.61□□□□□ -1.51
CAPN3-217ENST00000567817 TMPRSS11EQ9UL52 423 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms