RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 CCAR2Q8N163 923 aaKnown RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 CFAP52Q8N1V2 620 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 KIAA1524Q8TCG1 905 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 IGSF8Q969P0 613 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 TBC1D31Q96DN5 1066 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 TMA16Q96EY4 203 aaKnown RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 P2RY11Q96G91 374 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 MSANTD3Q96H12 275 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 C1orf74Q96LT6 269 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 C8orf33Q9H7E9 229 aaPredicted RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 TRMT1Q9NXH9 659 aaKnown RBP11.83□□□□□ -0.52
KARS-207ENST00000566560 STIM2Q9P246 746 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 CA14Q9ULX7 337 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 NEU3Q9UQ49 428 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 PCDHB3Q9Y5E6 796 aa11.83□□□□□ -0.52
KARS-207ENST00000566560 IGLV3-10A0A075B6K4 115 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 LRRD1A4D1F6 860 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 USP27XA6NNY8 438 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 H3BRJ5 948 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 DCXO43602 365 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 LUC7L3O95232 432 aaKnown RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 NDUFV2P19404 249 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 HOXC13P31276 330 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 ARL4AP40617 200 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 MARCKSL1P49006 195 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 ZNF135P52742 658 aaPredicted RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 CDH6P55285 790 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 ZXDAP98168 799 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 AMPD2Q01433 879 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 KDSRQ06136 332 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 TUSC1Q2TAM9 212 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 GAB4Q2WGN9 574 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 ODF2Q5BJF6 829 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 MPP7Q5T2T1 576 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 CHST9Q7L1S5 443 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 PEX26Q7Z412 305 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 RALGPS2Q86X27 583 aaPredicted RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 MFN1Q8IWA4 741 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 CCDC117Q8IWD4 279 aaPredicted RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 REXO1L1PQ8IX06 675 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 ETFBKMTQ8IXQ9 262 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 CARNMT1Q8N4J0 409 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 NAT16Q8N8M0 369 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 TRIM58Q8NG06 486 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 CHFRQ96EP1 664 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 XPO6Q96QU8 1125 aaKnown RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 MAGEB5Q9BZ81 275 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 ZYG11BQ9C0D3 744 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 PCDH18Q9HCL0 1135 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 DNAJC17Q9NVM6 304 aaKnown RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 MPP6Q9NZW5 540 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 PPARGC1AQ9UBK2 798 aaKnown RBP11.82□□□□□ -0.52
KARS-207ENST00000566560 AMFRQ9UKV5 643 aa11.82□□□□□ -0.52
KARS-207ENST00000566560 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.82□□□□□ -0.52
KARS-207ENST00000566560 BDP1A6H8Y1 2624 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 H0Y626 953 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 FGF10O15520 208 aaPredicted RBP11.81□□□□□ -0.52
KARS-207ENST00000566560 TULP3O75386 442 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 GLULP15104 373 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 GOT1P17174 413 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 CTNNA2P26232 953 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 EPHB2P29323 1055 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 HTR7P34969 479 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 CTNNA1P35221 906 aaKnown RBP11.81□□□□□ -0.52
KARS-207ENST00000566560 OPRD1P41143 372 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 EIF2DP41214 584 aaKnown RBP11.81□□□□□ -0.52
KARS-207ENST00000566560 CDH4P55283 916 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 C5orf22Q49AR2 442 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 ATP13A4Q4VNC1 1196 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 SLC44A4Q53GD3 710 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 ALFQ53S48 1182 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 RNF43Q68DV7 783 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 NAIF1Q69YI7 327 aaPredicted RBP11.81□□□□□ -0.52
KARS-207ENST00000566560 GRAMD4Q6IC98 578 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 C1orf228Q6PIY5 440 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 TXNDC11Q6PKC3 985 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 RFX8Q6ZV50 586 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 TFAP2DQ7Z6R9 452 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 NT5DC3Q86UY8 548 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 SIX5Q8N196 739 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 ZNF557Q8N988 423 aaPredicted RBP11.81□□□□□ -0.52
KARS-207ENST00000566560 KRT35Q92764 455 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 CD101Q93033 1021 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 EXOC4Q96A65 974 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 ZNF670Q9BS34 389 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 CALN1Q9BXU9 219 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 CATSPERBQ9H7T0 1116 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 DDX56Q9NY93 547 aaKnown RBP11.81□□□□□ -0.52
KARS-207ENST00000566560 WNT16Q9UBV4 365 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 TECTAO75443 2155 aa11.81□□□□□ -0.52
KARS-207ENST00000566560 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 CCDC66A2RUB6 948 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 DRGXA6NNA5 263 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 MIF4GDA9UHW6 222 aaKnown RBP11.8□□□□□ -0.52
KARS-207ENST00000566560 PI4K2BG5E9Z4 385 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 DAPK3O43293 454 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 KIF5CO60282 957 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 CLDN11O75508 207 aa11.8□□□□□ -0.52
KARS-207ENST00000566560 CNTN5O94779 1100 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms