RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 WASH4PA8MWX3 477 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TRDMT1O14717 391 aaKnown RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 PSTPIP1O43586 416 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 CACNG3O60359 315 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TSPAN3O60637 253 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 CYBBP04839 570 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 ADH5P11766 374 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TYRP14679 529 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 CTNNA2P26232 953 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 HOXD9P28356 352 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 TNFRSF8P28908 595 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 CTNNA1P35221 906 aaKnown RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 EIF2DP41214 584 aaKnown RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 RPS24P62847 133 aaKnown RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 PDK2Q15119 407 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TAZQ16635 292 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TUBB8Q3ZCM7 444 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 GLE1Q53GS7 698 aaKnown RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 MEI1Q5TIA1 1274 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TTC39BQ5VTQ0 682 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 LRRC31Q6UY01 552 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TPGS1Q6ZTW0 290 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 KIAA0907Q7Z7F0 614 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 NLRP14Q86W24 1093 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 RALGPS2Q86X27 583 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 CFAP52Q8N1V2 620 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 HJURPQ8NCD3 748 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 FIBINQ8TAL6 211 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 MSANTD3Q96H12 275 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 HES6Q96HZ4 224 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 LMLNQ96KR4 655 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 BBS2Q9BXC9 721 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 DHX35Q9H5Z1 703 aaKnown RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 C8orf33Q9H7E9 229 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 DDX56Q9NY93 547 aaKnown RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 RCOR3Q9P2K3 495 aaPredicted RBP13□□□□□ -0.33
SF3B3-206ENST00000565990 AMFRQ9UKV5 643 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 TBC1D30Q9Y2I9 924 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 A0A0C4DFX4 3053 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 NCOR1O75376 2440 aa13□□□□□ -0.33
SF3B3-206ENST00000565990 ZNF487B1APH4 448 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CES2O00748 559 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 SPOPO43791 374 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 TBL1XO60907 577 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 SRGAP2O75044 1071 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CLDN11O75508 207 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CNTN5O94779 1100 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 KDELR1P24390 212 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 OPRD1P41143 372 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 SSR1P43307 286 aaKnown RBP12.99□□□□□ -0.33
SF3B3-206ENST00000565990 GALK1P51570 392 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 VCPP55072 806 aaKnown RBP12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CDH4P55283 916 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 STARD6P59095 220 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 ZXDAP98168 799 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CASP8Q14790 479 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 SMTNL2Q2TAL5 461 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 ANO4Q32M45 955 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 ALFQ53S48 1182 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 RABGAP1LQ5R372 815 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 C1orf228Q6PIY5 440 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CHST9Q7L1S5 443 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 PEX26Q7Z412 305 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CHSY1Q86X52 802 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 MAP7D3Q8IWC1 876 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 KATNAL2Q8IYT4 538 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 RCOR2Q8IZ40 523 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 PHTF2Q8N3S3 785 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 GOLGA6L1Q8N7Z2 621 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 RAPGEF5Q92565 580 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 FAF2Q96CS3 445 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 RPRD1AQ96P16 312 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-206ENST00000565990 KCTD15Q96SI1 283 aaPredicted RBP12.99□□□□□ -0.33
SF3B3-206ENST00000565990 ZYG11BQ9C0D3 744 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 PCDH18Q9HCL0 1135 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.99□□□□□ -0.33
SF3B3-206ENST00000565990 GPATCH2LQ9NWQ4 482 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 MUTYHQ9UIF7 546 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 CLEC4EQ9ULY5 219 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 SNX12Q9UMY4 172 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 SLC27A6Q9Y2P4 619 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.99□□□□□ -0.33
SF3B3-206ENST00000565990 COL4A3Q01955 1670 aa12.99□□□□□ -0.33
SF3B3-206ENST00000565990 VCANP13611 3396 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 A0A1B0GVM2 712 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 TCAF2A6NFQ2 919 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 MIF4GDA9UHW6 222 aaKnown RBP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 NEDD8-MDP1E9PL57 170 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 SPECC1L-ADORA2AF8WAN1 911 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 DDX3YO15523 660 aaKnown RBP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 TULP3O75386 442 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 LUC7L3O95232 432 aaKnown RBP12.98□□□□□ -0.33
SF3B3-206ENST00000565990 SLC34A2O95436 690 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 IVLP07476 585 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 CD48P09326 243 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 RHOQP17081 205 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 CTHP32929 405 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 GGCXP38435 758 aa12.98□□□□□ -0.33
SF3B3-206ENST00000565990 SLC6A11P48066 632 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms