RNA–Protein interactions for RNA: ENST00000563553.1

LINC01416-201, Transcript of long intergenic non-protein coding RNA 1416, humanhuman

TSL 1 (best) BASIC

Gene LINC01416, Length 2,310 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01416-201ENST00000563553 KLHL29Q96CT2 875 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 RUNDC3BQ96NL0 473 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 HAPLN3Q96S86 360 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 TTC1Q99614 292 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 MYOCQ99972 504 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 RNF26Q9BY78 433 aaPredicted RBP3.72□□□□□ -1.81
LINC01416-201ENST00000563553 TXLNGYQ9BZA5 131 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 VPS16Q9H269 839 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 BHMT2Q9H2M3 363 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 RABEP2Q9H5N1 569 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 ECT2Q9H8V3 914 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 PANK4Q9NVE7 773 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 TBCCD1Q9NVR7 557 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 ADAM22Q9P0K1 906 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 LRWD1Q9UFC0 647 aa3.72□□□□□ -1.81
LINC01416-201ENST00000563553 DDX25Q9UHL0 483 aaKnown RBP3.72□□□□□ -1.81
LINC01416-201ENST00000563553 APOBEC2Q9Y235 224 aaKnown RBP3.72□□□□□ -1.81
LINC01416-201ENST00000563553 MARF1Q9Y4F3 1742 aaKnown RBP3.72□□□□□ -1.81
LINC01416-201ENST00000563553 CTNND1O60716 968 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DTNBO60941 627 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PHF2O75151 1096 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ITGAMP11215 1152 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PIM1P11309 404 aaPredicted RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ZFXP17010 805 aaPredicted RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ALDH1B1P30837 517 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PCK1P35558 622 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MAGEA1P43355 309 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ACADVLP49748 655 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SERPINB8P50452 374 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PEX5P50542 639 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RBM5P52756 815 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MRPS21P82921 87 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RNASELQ05823 741 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SP140Q13342 867 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ITGA9Q13797 1035 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 GCKRQ14397 625 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PLS1Q14651 629 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 NAB2Q15742 525 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 UAP1Q16222 522 aaPredicted RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ASTE1Q2TB18 679 aaPredicted RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 FAM153CQ494X1 144 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 OR52E8Q6IFG1 317 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 NFRKBQ6P4R8 1299 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MED25Q71SY5 747 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PDZD4Q76G19 769 aaPredicted RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RD3Q7Z3Z2 195 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RASGEF1CQ8N431 466 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SLC44A3Q8N4M1 653 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DNAJC9Q8WXX5 260 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 FAM136AQ96C01 138 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RBM17Q96I25 401 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RAX2Q96IS3 184 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 LZTS2Q9BRK4 669 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 UBAC1Q9BSL1 405 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MRI1Q9BV20 369 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MMADHCQ9H3L0 296 aaPredicted RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DCLRE1BQ9H816 532 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 METTL14Q9HCE5 456 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 FAM30AQ9NZY2 134 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 FAM153AQ9UHL3 310 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ZNF148Q9UQR1 794 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RTL9Q8NET4 1388 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MYH7P12883 1935 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MYH13Q9UKX3 1938 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 A0A1B0GTW7 788 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SMIM31A0A1B0GVY4 71 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MACROD2A1Z1Q3 448 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PGRMC1O00264 195 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RANBP6O60518 1105 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ULK1O75385 1050 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 UNC5CO95185 931 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PYGLP06737 847 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SNRPA1P09661 255 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 FAM163BP0C2L3 166 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 GCSHP23434 173 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 CCNE1P24864 410 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 TMOD1P28289 359 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 KRT2P35908 639 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 VHLP40337 213 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 GPR3P46089 330 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 AVPR1BP47901 424 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 STX17P56962 302 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RAP2BP61225 183 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 MAGOHP61326 146 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SIM1P81133 766 aaPredicted RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SRSF2Q01130 221 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 TFCP2Q12800 502 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DHX34Q14147 1143 aaKnown RBP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 PTPN21Q16825 1174 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 KRT71Q3SY84 523 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 HSP90AA4PQ58FG1 418 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 KLHL10Q6JEL2 608 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 FBXO42Q6P3S6 717 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 TMEM154Q6P9G4 183 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 ERICH1Q86X53 443 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 RAB11FIP4Q86YS3 637 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 SYCE1Q8N0S2 351 aa3.71□□□□□ -1.82
LINC01416-201ENST00000563553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.71□□□□□ -1.82
LINC01416-201ENST00000563553 NEK9Q8TD19 979 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms