RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 LUZP1Q86V48 1076 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 FAM131BQ86XD5 332 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 APCDD1Q8J025 514 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 OR2T3Q8NH03 318 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 GANCQ8TET4 914 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 IGSF8Q969P0 613 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 TOE1Q96GM8 510 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 RPL10LQ96L21 214 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 HSPA12BQ96MM6 686 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 PRMT1Q99873 361 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 AGPAT1Q99943 283 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 EDEM2Q9BV94 578 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 SELENOOQ9BVL4 669 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 MTG2Q9H4K7 406 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 CBX8Q9HC52 389 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 CD248Q9HCU0 757 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 RTN4Q9NQC3 1192 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 SUN2Q9UH99 717 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 INTS6Q9UL03 887 aaKnown RBP8.45□□□□□ -1.06
SNX1-207ENST00000559401 ERVW-1Q9UQF0 538 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 SNX10Q9Y5X0 201 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 DMDP11532 3685 aa8.45□□□□□ -1.06
SNX1-207ENST00000559401 CEP250Q9BV73 2442 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 DCDC2BA2VCK2 349 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 ANKRD62A6NC57 917 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TMCO5BA8MYB1 307 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 RNASEH1O60930 286 aaKnown RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 SRGAP2O75044 1071 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 RHOCP08134 193 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 KRT3P12035 628 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TNFAIP3P21580 790 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 ITPKAP23677 461 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 MZF1P28698 734 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 CD6P30203 668 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 DPP6P42658 865 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 CXCR3P49682 368 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 STK19P49842 368 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 TPMTP51580 245 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 IRAK1P51617 712 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 COPAP53621 1224 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 OXCT1P55809 520 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 ECT2LQ008S8 904 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 EIF4EBP2Q13542 120 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 CAMK2GQ13555 558 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 SLC12A1Q13621 1099 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 IQCB1Q15051 598 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 ASIC2Q16515 512 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 C15orf59Q2T9L4 293 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 ARL13BQ3SXY8 428 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TTC31Q49AM3 519 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 TRIM61Q5EBN2 209 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 SPDYCQ5MJ68 293 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 SYCP2LQ5T4T6 812 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 ZNF776Q68DI1 518 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 RNF43Q68DV7 783 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TRNP1Q6NT89 227 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 DNAJC24Q6P3W2 148 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TFAP2DQ7Z6R9 452 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 C14orf80Q86SX3 495 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 SYT12Q8IV01 421 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 JOSD2Q8TAC2 188 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 RXFP2Q8WXD0 754 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 SNX19Q92543 992 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TTC17Q96AE7 1141 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 PGAP3Q96FM1 320 aaPredicted RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 PPP1R9BQ96SB3 815 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 PCDHB18PQ96TA0 734 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 RTKNQ9BST9 563 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 FUCA2Q9BTY2 467 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 GPR174Q9BXC1 333 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 NUSAP1Q9BXS6 441 aaKnown RBP8.44□□□□□ -1.06
SNX1-207ENST00000559401 ADAM33Q9BZ11 813 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 MUC3BQ9H195 1237 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TMEM245Q9H330 911 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 FBRSQ9HAH7 460 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 PRSS16Q9NQE7 514 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 RXFP3Q9NSD7 469 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 ARHGEF38Q9NXL2 777 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 DLL3Q9NYJ7 618 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 SLC25A13Q9UJS0 675 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 TMEM59LQ9UK28 342 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 VPS28Q9UK41 221 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 WDR87Q6ZQQ6 2873 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 ADAMTS9Q9P2N4 1935 aa8.44□□□□□ -1.06
SNX1-207ENST00000559401 A0A1B0GTH6 734 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 EDDM13A0A1B0GTR0 161 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 A0A1W2PQC6 194 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 LNP1A1A4G5 178 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 TTC34A8MYJ7 566 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 E9PAM4 449 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 SLC30A4O14863 429 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 BNIP3LO60238 219 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 SIN3BO75182 1162 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 CLDN11O75508 207 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 CNTN5O94779 1100 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 SRPRAP08240 638 aaKnown RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 UNGP13051 313 aaPredicted RBP8.43□□□□□ -1.06
SNX1-207ENST00000559401 DESP17661 470 aa8.43□□□□□ -1.06
SNX1-207ENST00000559401 GPD1P21695 349 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms