RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 MCF2P10911 925 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 GLULP15104 373 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 DESP17661 470 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ATP5DP30049 168 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 GALNSP34059 522 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 EPHX2P34913 555 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ADH7P40394 386 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 HSPA7P48741 367 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ALDH9A1P49189 494 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CARSP49589 748 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 SEPHS1P49903 392 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PCBP4P57723 403 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 SNRPNP63162 240 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 NOP14P78316 857 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 SP4Q02446 784 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 LAMTOR4Q0VGL1 99 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CALCOCO2Q13137 446 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PMS2P11Q13670 270 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CAPSQ13938 189 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PIGHQ14442 188 aaPredicted RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 MESDQ14696 234 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ACAP1Q15027 740 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 STILQ15468 1287 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PFKFB4Q16877 469 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.5□□□□□ -1.21
MARK3-212ENST00000558223 PAN2Q504Q3 1202 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 XP32Q5T750 250 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ZNF468Q5VIY5 522 aaPredicted RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 DUPD1Q68J44 220 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CRELD2Q6UXH1 353 aaPredicted RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 EP400NLQ6ZTU2 488 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 NEK10Q6ZWH5 1172 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ARMCX6Q7L4S7 300 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 HEATR4Q86WZ0 1026 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 SLC13A5Q86YT5 568 aaPredicted RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 CCDC103Q8IW40 242 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 NDUFAF2Q8N183 169 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 RCBTB1Q8NDN9 531 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 NLGN2Q8NFZ4 835 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 HDAC7Q8WUI4 952 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 SLC20A1Q8WUM9 679 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 RNF141Q8WVD5 230 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PRPF31Q8WWY3 499 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 CASKIN2Q8WXE0 1202 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ASB12Q8WXK4 309 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 RIN2Q8WYP3 895 aaPredicted RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 MAGOHBQ96A72 148 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 ARHGEF26Q96DR7 871 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 RBM41Q96IZ5 413 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 ZC3H10Q96K80 434 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 SPATA33Q96N06 139 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PCDHB18PQ96TA0 734 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PCYT2Q99447 389 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 FMO2Q99518 471 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 MCMBPQ9BTE3 642 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 KIFC3Q9BVG8 833 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 IKZF4Q9H2S9 585 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CNOT10Q9H9A5 744 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 SUGCTQ9HAC7 445 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CYP3A43Q9HB55 503 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 ZCCHC17Q9NP64 241 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 ACSS2Q9NR19 701 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 MRGBPQ9NV56 204 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CLEC1BQ9P126 229 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 RBPJLQ9UBG7 517 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PPARGC1AQ9UBK2 798 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 CPSF3Q9UKF6 684 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 OGDHLQ9ULD0 1010 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 PACSIN2Q9UNF0 486 aaPredicted RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 SRPK3Q9UPE1 567 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 SCAF8Q9UPN6 1271 aaKnown RBP7.5□□□□□ -1.21
MARK3-212ENST00000558223 PCDHB4Q9Y5E5 795 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 CNTNAP2Q9UHC6 1331 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 MYH11P35749 1972 aa7.5□□□□□ -1.21
MARK3-212ENST00000558223 SMCHD1A6NHR9 2005 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 RLFQ13129 1914 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 PABPN1LA6NDY0 278 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 TISP43B9A030 160 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 AGPSO00116 658 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 ARNTLO00327 626 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 SHOX2O60902 331 aaPredicted RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 RNGTTO60942 597 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 ADAM23O75077 832 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 PPFIA2O75334 1257 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 CNMDO75829 334 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 PROSCO94903 275 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 CYP17A1P05093 508 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 NUDT17P0C025 328 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 TMEM191BP0C7N4 346 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 HARSP12081 509 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 ACO1P21399 889 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 PROZP22891 400 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 TPP2P29144 1249 aaPredicted RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 CDH5P33151 784 aaPredicted RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 DNA2P51530 1060 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 GSCP56915 257 aaPredicted RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 BCAR1P56945 870 aa7.49□□□□□ -1.21
MARK3-212ENST00000558223 NLRP11P59045 1033 aaKnown RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 CACNB2Q08289 660 aaPredicted RBP7.49□□□□□ -1.21
MARK3-212ENST00000558223 ZSCAN26Q16670 478 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms