RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 TMEM215Q68D42 235 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 RFWD3Q6PCD5 774 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 CHST9Q7L1S5 443 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 TRIM46Q7Z4K8 759 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 RABEPKQ7Z6M1 372 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 UNC45BQ8IWX7 931 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 FAM217AQ8IXS0 508 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 DEPDC4Q8N2C3 294 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 TMEM151AQ8N4L1 468 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 MINDY1Q8N5J2 469 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 ZNF366Q8N895 744 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 LMO3Q8TAP4 145 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 CLEC4CQ8WTT0 213 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 IRGQQ8WZA9 623 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 FAM149B1Q96BN6 582 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 ZNF419Q96HQ0 510 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 ZSWIM1Q9BR11 485 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 SRRTQ9BXP5 876 aaKnown RBP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 INTS2Q9H0H0 1204 aaKnown RBP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 CAPN10Q9HC96 672 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 UBE2TQ9NPD8 197 aaPredicted RBP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 PLA2G4CQ9UP65 541 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.96□□□□□ -1.3
PSEN1-216ENST00000556066 ASXL3Q9C0F0 2248 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 FREM2Q5SZK8 3169 aa6.96□□□□□ -1.3
PSEN1-216ENST00000556066 MUC22E2RYF6 1773 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 SPAARA0A1B0GVQ0 90 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 TYW5A2RUC4 315 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 GOLGA6L3A6NEY3 463 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 C1QTNF9BB2RNN3 333 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 KCNJ18B7U540 433 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 CAPN9O14815 690 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 PMM2O15305 246 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 THAP12O43422 761 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ACSL4O60488 711 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 FBXO21O94952 628 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 LETM1O95202 739 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 FGFR1OPO95684 399 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 LATS1O95835 1130 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 MOCS2O96007 188 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ATP5BP06576 529 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 C1QTNF9P0C862 333 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 PABPC1P11940 636 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 POLR2EP19388 210 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 OXTRP30559 389 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 CD70P32970 193 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 USP8P40818 1118 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ZNF132P52740 706 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 COPAP53621 1224 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 RAB15P59190 212 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 SIM1P81133 766 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 GCNT1Q02742 428 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 DHX9Q08211 1270 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 SEMA3BQ13214 749 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ENPP2Q13822 863 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 CAMK4Q16566 473 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 PEAR1Q5VY43 1037 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 NUGGCQ68CJ6 796 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 MBLAC2Q68D91 279 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 MSANTD2Q6P1R3 559 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 DENND1BQ6P3S1 775 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 GAS2L3Q86XJ1 694 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 MFN1Q8IWA4 741 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 TRIM59Q8IWR1 403 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ELOA2Q8IYF1 753 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 AHI1Q8N157 1196 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ZCCHC9Q8N567 271 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 KDF1Q8NAX2 398 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 WFDC5Q8TCV5 224 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 GPT2Q8TD30 523 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 WFIKKN2Q8TEU8 576 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 SNX19Q92543 992 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 HSFY1Q96LI6 401 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 KREMEN1Q96MU8 473 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 CRACR2AQ9BSW2 395 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 NUP58Q9BVL2 599 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ITM2CQ9NQX7 267 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 WSB2Q9NYS7 404 aaPredicted RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 USP36Q9P275 1121 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 SUSD2Q9UGT4 822 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 GGA2Q9UJY4 613 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 ZMIZ1Q9ULJ6 1067 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 WASF3Q9UPY6 502 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 NAALADL1Q9UQQ1 740 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 PCDHB11Q9Y5F2 797 aa6.95□□□□□ -1.3
PSEN1-216ENST00000556066 NYNRINQ9P2P1 1898 aaKnown RBP6.95□□□□□ -1.3
PSEN1-216ENST00000556066 APC2O95996 2303 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 A0A1B0GTW7 788 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 IRAK2O43187 625 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 MED7O43513 233 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 HYAL3O43820 417 aaPredicted RBP6.94□□□□□ -1.3
PSEN1-216ENST00000556066 IGLV3-27P01718 113 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 DLDP09622 509 aaKnown RBP6.94□□□□□ -1.3
PSEN1-216ENST00000556066 GNA15P30679 374 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 SLC6A4P31645 630 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 ACADSBP45954 432 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 ST8SIA6P61647 398 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 RPS24P62847 133 aaKnown RBP6.94□□□□□ -1.3
PSEN1-216ENST00000556066 RING1Q06587 406 aa6.94□□□□□ -1.3
PSEN1-216ENST00000556066 GRIK2Q13002 908 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms