RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 TUSC3Q13454 348 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 TAF11Q15544 211 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 ISLR2Q6UXK2 745 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 GPRIN1Q7Z2K8 1008 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 DENND1CQ8IV53 801 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 RNF148Q8N7C7 305 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 ASIC4Q96FT7 647 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 LHX5Q9H2C1 402 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 GMIPQ9P107 970 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 ALDH1A1P00352 501 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 MYL2P10916 166 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 COG7P83436 770 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 SRPK1Q96SB4 655 aaKnown RBP12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 OSBPL1AQ9BXW6 950 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 HIPK3Q9H422 1215 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF395Q9H8N7 513 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 CCT8L1PA6NM43 557 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 CSHL1Q14406 222 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 DPY19L2P1Q6NXN4 242 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 LINGO4Q6UY18 593 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 PRPF39Q86UA1 669 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 PPFIBP2Q8ND30 876 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 RUBCNQ92622 972 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 E2F7Q96AV8 911 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 IL1RL2Q9HB29 575 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 BPIFA1Q9NP55 256 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 MAN1C1Q9NR34 630 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 IPO11Q9UI26 975 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 DOCK3Q8IZD9 2030 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 FAM72CH0Y354 149 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZBTB24O43167 697 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 PAGE1O75459 146 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 CDH18Q13634 790 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 SLC1A5Q15758 541 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 FAM72AQ5TYM5 149 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 ATG16L1Q676U5 607 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 FAM72DQ6L9T8 149 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 TAC4Q86UU9 113 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 SLC26A11Q86WA9 606 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 FAM72BQ86X60 149 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 KHSRPQ92945 711 aaKnown RBP eCLIP12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 MOCOSQ96EN8 888 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 HSFY1Q96LI6 401 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 CATSPERBQ9H7T0 1116 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 ARHGEF4Q9NR80 690 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 CHRAC1Q9NRG0 131 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 ARHGEF38Q9NXL2 777 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 TMEM59LQ9UK28 342 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 APOBEC2Q9Y235 224 aaKnown RBP12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 NUMA1Q14980 2115 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 IGKV6-21A0A0C4DH24 114 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 GFAPP14136 432 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 LAMB3Q13751 1172 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 MTFR1Q15390 333 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZRANB3Q5FWF4 1079 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 UNC5AQ6ZN44 842 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 AGMOQ6ZNB7 445 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 SYBUQ9NX95 663 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 DTLQ9NZJ0 730 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 VPS28Q9UK41 221 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 PCDHGC3Q9UN70 934 aa12.51□□□□□ -0.41
ARHGEF40-206ENST00000555232 E5RI56 91 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 E9PBE3 544 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 KLHL41O60662 606 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 CHRNA1P02708 482 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 BFSP2Q13515 415 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 DLG2Q15700 870 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 CNGA3Q16281 694 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 N4BP2L1Q5TBK1 243 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF470Q6ECI4 717 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 TTC9BQ8N6N2 239 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 DQX1Q8TE96 717 aaKnown RBP12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 CRTAC1Q9NQ79 661 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 GKN1Q9NS71 199 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 PPME1Q9Y570 386 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 GPR32O75388 356 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZMPSTE24O75844 475 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 CD86P42081 329 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 AQP5P55064 265 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 NFE2Q16621 373 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 MUM1Q2TAK8 710 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 SGO1Q5FBB7 561 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 TTC39BQ5VTQ0 682 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 SMG8Q8ND04 991 aaKnown RBP12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 C3orf58Q8NDZ4 430 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 GANCQ8TET4 914 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF358Q9NW07 568 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 MORF4L1Q9UBU8 362 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 AIM2O14862 343 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 XPO1O14980 1071 aaKnown RBP12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 TLR5O60602 858 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 HIC1Q14526 733 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 SLC25A52Q3SY17 297 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 MARC1Q5VT66 337 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 DDIASQ8IXT1 998 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 THTPAQ9BU02 230 aa12.5□□□□□ -0.41
ARHGEF40-206ENST00000555232 ADAMTS10Q9H324 1103 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms