RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 M0QYT0 321 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 SIN3BO75182 1162 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 PAGE1O75459 146 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 GJB3O75712 270 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 GFPT2O94808 682 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 KCNK5O95279 499 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 LSM8O95777 96 aaKnown RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 CYP1A1P04798 512 aaPredicted RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 SERPINF2P08697 491 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 ATP1A3P13637 1013 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 CCR1P32246 355 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 ACSL1P33121 698 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 SCNN1AP37088 669 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 CXCR3P49682 368 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 BNC1Q01954 994 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 MYL5Q02045 173 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 PTP4A2Q12974 167 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 NME3Q13232 169 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 CDH18Q13634 790 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 AUHQ13825 339 aaKnown RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 ARID5BQ14865 1188 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 SYCP1Q15431 976 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 STX1AQ16623 288 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 DUOXA1Q1HG43 343 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 HNRNPA1L2Q32P51 320 aaKnown RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 C5orf22Q49AR2 442 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 C9orf64Q5T6V5 341 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 NAA35Q5VZE5 725 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 CPA5Q8WXQ8 436 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 C18orf8Q96DM3 657 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 PGAP3Q96FM1 320 aaPredicted RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 NOX5Q96PH1 765 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 PCDHB18PQ96TA0 734 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 ORAI3Q9BRQ5 295 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 RSPH9Q9H1X1 276 aaPredicted RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 NLRC4Q9NPP4 1024 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 ANO10Q9NW15 660 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 ARHGEF38Q9NXL2 777 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 SERGEFQ9UGK8 458 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 SLCO3A1Q9UIG8 710 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 SLC6A14Q9UN76 642 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 ERVW-1Q9UQF0 538 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 USP24Q9UPU5 2620 aa13.45□□□□□ -0.26
NPAS3-209ENST00000551008 KMT2BQ9UMN6 2715 aaPredicted RBP13.45□□□□□ -0.26
NPAS3-209ENST00000551008 A0A1B0GVM2 712 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 TCAF2A6NFQ2 919 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 METTL12A8MUP2 240 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 HAX1O00165 279 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 CNTN5O94779 1100 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 ASLP04424 464 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 CFIP05156 583 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 ATP5BP06576 529 aaKnown RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 VAV1P15498 845 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 PDGFRAP16234 1089 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 PMLP29590 882 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 SOX5P35711 763 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 MAPK8P45983 427 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 PLK1P53350 603 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 RNASE9P60153 205 aaKnown RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 ARID5AQ03989 594 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 TYRO3Q06418 890 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 CCDC183Q5T5S1 534 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 FAM102AQ5T9C2 384 aaPredicted RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 FAM124AQ86V42 546 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 ZDHHC17Q8IUH5 632 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 DHX40Q8IX18 779 aaKnown RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 ZNF557Q8N988 423 aaPredicted RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 CADM4Q8NFZ8 388 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 RPL10LQ96L21 214 aaKnown RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 FAM129BQ96TA1 746 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 NUSAP1Q9BXS6 441 aaKnown RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 C6orf106Q9H6K1 298 aaPredicted RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 KIAA1522Q9P206 1035 aaPredicted RBP13.44□□□□□ -0.26
NPAS3-209ENST00000551008 VANGL2Q9ULK5 521 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 PLA2G4CQ9UP65 541 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 CEP83Q9Y592 693 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 AKAP13Q12802 2813 aa13.44□□□□□ -0.26
NPAS3-209ENST00000551008 LRRC10BA6NIK2 292 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 H0Y626 953 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 GOLGA8SH3BPF8 625 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 ZBTB24O43167 697 aaPredicted RBP13.43□□□□□ -0.26
NPAS3-209ENST00000551008 NDUFS2O75306 463 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 GJB6O95452 261 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 SLC2A3P11169 496 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 ABCB4P21439 1286 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 MMP8P22894 467 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 DPP6P42658 865 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 SULT1E1P49888 294 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 CDR2Q01850 454 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 SEMA3BQ13214 749 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 E2F5Q15329 346 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 ALFQ53S48 1182 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 DCAF12L1Q5VU92 463 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 PSAPL1Q6NUJ1 521 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 SASS6Q6UVJ0 657 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 PIP4P1Q86T03 277 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 ERICH1Q86X53 443 aa13.43□□□□□ -0.26
NPAS3-209ENST00000551008 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms