RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 SPTLC3Q9NUV7 552 aa11.57□□□□□ -0.56
RAB5B-208ENST00000550283 RRN3Q9NYV6 651 aa11.57□□□□□ -0.56
RAB5B-208ENST00000550283 THAP10Q9P2Z0 257 aaPredicted RBP11.57□□□□□ -0.56
RAB5B-208ENST00000550283 EBF1Q9UH73 591 aa11.57□□□□□ -0.56
RAB5B-208ENST00000550283 SLC8A2Q9UPR5 921 aa11.57□□□□□ -0.56
RAB5B-208ENST00000550283 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.57□□□□□ -0.56
RAB5B-208ENST00000550283 ACTL7AQ9Y615 435 aa11.57□□□□□ -0.56
RAB5B-208ENST00000550283 IGLV3-10A0A075B6K4 115 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 TCRBV21S2A2A0A5A6 115 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 PRR23AA6NEV1 266 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 DRGXA6NNA5 263 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 PROB1E7EW31 1015 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 E9PAM4 449 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 SRGAP2O75044 1071 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 KRT37O76014 449 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 HOXB2P14652 356 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 VAV1P15498 845 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 GLDCP23378 1020 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 HOXA6P31267 233 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 GALCP54803 685 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 PITRM1Q5JRX3 1037 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 STRADAQ7RTN6 431 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 TFAP2DQ7Z6R9 452 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 WDR5BQ86VZ2 330 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 RASSF3Q86WH2 238 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 CHPFQ8IZ52 775 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 DCLK2Q8N568 766 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 OR8K1Q8NGG5 319 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 HMGB4Q8WW32 186 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 VCPIP1Q96JH7 1222 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 PSMB7Q99436 277 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 TMEM245Q9H330 911 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 SLCO3A1Q9UIG8 710 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 MBD1Q9UIS9 605 aaPredicted RBP11.56□□□□□ -0.56
RAB5B-208ENST00000550283 TFR2Q9UP52 801 aa11.56□□□□□ -0.56
RAB5B-208ENST00000550283 A0A0D9SEW6 157 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 H0Y626 953 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 RNF103O00237 685 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 SNAP91O60641 907 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 ATG13O75143 517 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 APBB3O95704 486 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 F9P00740 461 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 SLC2A3P11169 496 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 NDUFV2P19404 249 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 IL1R2P27930 398 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 DGKEP52429 567 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 COPAP53621 1224 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 PLEKHG6Q3KR16 790 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 CCDC122Q5T0U0 273 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 ALKBH5Q6P6C2 394 aaKnown RBP11.55□□□□□ -0.56
RAB5B-208ENST00000550283 KBTBD6Q86V97 674 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 LONP2Q86WA8 852 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 CACUL1Q86Y37 369 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 NETO2Q8NC67 525 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 TSTD1Q8NFU3 115 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 TTC17Q96AE7 1141 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 ACDQ96AP0 544 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 RPL10LQ96L21 214 aaKnown RBP11.55□□□□□ -0.56
RAB5B-208ENST00000550283 HAPLN3Q96S86 360 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 DDX50Q9BQ39 737 aaKnown RBP11.55□□□□□ -0.56
RAB5B-208ENST00000550283 CNPY3Q9BT09 278 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 MKRN2Q9H000 416 aaKnown RBP11.55□□□□□ -0.56
RAB5B-208ENST00000550283 PARVAQ9NVD7 372 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 FZD10Q9ULW2 581 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 PCDHGA2Q9Y5H1 932 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 SPTBN4Q9H254 2564 aa11.55□□□□□ -0.56
RAB5B-208ENST00000550283 A0A1B0GVM2 712 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 TCAF2A6NFQ2 919 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 TTC34A8MYJ7 566 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 K7ERQ8 282 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 AXIN1O15169 862 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 LRCH4O75427 683 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 LRIG2O94898 1065 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 MT-CO1P00395 513 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 CYP1A2P05177 515 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 PSMA2P25787 234 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 CCDC173Q0VFZ6 552 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 SEMA3BQ13214 749 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 CDH18Q13634 790 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 EOGTQ5NDL2 527 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
RAB5B-208ENST00000550283 SCYL2Q6P3W7 929 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 DCUN1D2Q6PH85 259 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 SND1Q7KZF4 910 aaKnown RBP eCLIP11.54□□□□□ -0.56
RAB5B-208ENST00000550283 NLRP14Q86W24 1093 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 AHI1Q8N157 1196 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 OR7D4Q8NG98 312 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 EXOC4Q96A65 974 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 MRGPRX1Q96LB2 322 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 C1orf74Q96LT6 269 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 FEM1AQ9BSK4 669 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 KLC2Q9H0B6 622 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 EPC1Q9H2F5 836 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 NOL6Q9H6R4 1146 aaKnown RBP11.54□□□□□ -0.56
RAB5B-208ENST00000550283 OR12D3Q9UGF7 316 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 PCSK1NQ9UHG2 260 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 SLC12A6Q9UHW9 1150 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 ERVW-1Q9UQF0 538 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 TBC1D30Q9Y2I9 924 aa11.54□□□□□ -0.56
RAB5B-208ENST00000550283 MFHAS1Q9Y4C4 1052 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms