RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 POC5Q8NA72 575 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 ARRDC4Q8NCT1 418 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 STAMQ92783 540 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 MAP6Q96JE9 813 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 VPS50Q96JG6 964 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 CCDC114Q96M63 670 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 MLPHQ9BV36 600 aaPredicted RBP5.79□□□□□ -1.48
DDB1-219ENST00000541513 MRPL1Q9BYD6 325 aaKnown RBP5.79□□□□□ -1.48
DDB1-219ENST00000541513 KRT23Q9C075 422 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 KLHL4Q9C0H6 718 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 INTS2Q9H0H0 1204 aaKnown RBP5.79□□□□□ -1.48
DDB1-219ENST00000541513 NELFAQ9H3P2 528 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 SEMA4BQ9NPR2 832 aaPredicted RBP5.79□□□□□ -1.48
DDB1-219ENST00000541513 DDX4Q9NQI0 724 aaKnown RBP5.79□□□□□ -1.48
DDB1-219ENST00000541513 NINJ2Q9NZG7 142 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 EHD2Q9NZN4 543 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 ASH2LQ9UBL3 628 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 FTSJ1Q9UET6 329 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 NARFQ9UHQ1 456 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 TUBE1Q9UJT0 475 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 APPL1Q9UKG1 709 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 ACSL6Q9UKU0 697 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 NFU1Q9UMS0 254 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 TRPV2Q9Y5S1 764 aa5.79□□□□□ -1.48
DDB1-219ENST00000541513 MAP3K15Q6ZN16 1313 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 MYH3P11055 1940 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 GOLGA6L10A0A0M3HER8 536 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 FRMD3A2A2Y4 597 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 URADA6NGE7 173 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 TMEM233B4DJY2 109 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ERVV-1B6SEH8 477 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SHISA8B8ZZ34 492 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ZNF263O14978 683 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 CCP110O43303 1012 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 NEMFO60524 1076 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 CUTAO60888 179 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 PPP6R2O75170 966 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ADAMTS4O75173 837 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 RASSF9O75901 435 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 BCAS2O75934 225 aaPredicted RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 SEC14L2O76054 403 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SIX3O95343 332 aaPredicted RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 FTCDO95954 541 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 EIF2S1P05198 315 aaKnown RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 CPA1P15085 419 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 CCNA2P20248 432 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SP100P23497 879 aaPredicted RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 ICAM3P32942 547 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 PPARGP37231 505 aaPredicted RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 ASMTP46597 345 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SLC11A2P49281 568 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 LUMP51884 338 aaPredicted RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 CTXN1P60606 82 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 PRAMEP78395 509 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ARF5P84085 180 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ATP1A4Q13733 1029 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 NOLC1Q14978 699 aaKnown RBP eCLIP5.78□□□□□ -1.483e-6■□□□□ 10.5
DDB1-219ENST00000541513 DUOXA2Q1HG44 320 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 CAVIN4Q5BKX8 364 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ZNF484Q5JVG2 852 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 COLEC12Q5KU26 742 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SFRP5Q5T4F7 317 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 CCDC183Q5T5S1 534 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 STEAP3Q658P3 488 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 MCTP1Q6DN14 999 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 KLHL35Q6PF15 583 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 FAM111BQ6SJ93 734 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SARM1Q6SZW1 724 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 MSANTD1Q6ZTZ1 278 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SMIM5Q71RC9 77 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 UBE3BQ7Z3V4 1068 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 TRIM48Q8IWZ4 208 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 PEX5LQ8IYB4 626 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ZGPATQ8N5A5 531 aaKnown RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 DNAJC5GQ8N7S2 189 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ANKRD49Q8WVL7 239 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 WDR60Q8WVS4 1066 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 POMGNT1Q8WZA1 660 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 TNPO1Q92973 898 aaKnown RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 CFAP57Q96MR6 1250 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 TTPALQ9BTX7 342 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 PDE11AQ9HCR9 933 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 POLE3Q9NRF9 147 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 KCND2Q9NZV8 630 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 CWC15Q9P013 229 aaKnown RBP5.78□□□□□ -1.48
DDB1-219ENST00000541513 ATP10DQ9P241 1426 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 DKK4Q9UBT3 224 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 ANAPC2Q9UJX6 822 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 EXOC7Q9UPT5 735 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 TBC1D30Q9Y2I9 924 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 GDAQ9Y2T3 454 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 SRCAPQ6ZRS2 3230 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 LAMB2P55268 1798 aa5.78□□□□□ -1.48
DDB1-219ENST00000541513 hCG_1809904A0A1W2PP81 198 aa5.77□□□□□ -1.49
DDB1-219ENST00000541513 A0A1W2PPE2 198 aa5.77□□□□□ -1.49
DDB1-219ENST00000541513 A0A1W2PR64 198 aa5.77□□□□□ -1.49
DDB1-219ENST00000541513 CDRT15L2A8MXV6 281 aa5.77□□□□□ -1.49
DDB1-219ENST00000541513 A8MZ25 164 aa5.77□□□□□ -1.49
DDB1-219ENST00000541513 IKBKBO14920 756 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms