RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SNX30Q5VWJ9 437 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 MRPL14Q6P1L8 145 aaKnown RBP6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 MZT2AQ6P582 158 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 LCLAT1Q6UWP7 414 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZNF852Q6ZMS4 543 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 TPRG1Q6ZUI0 275 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 TTC30AQ86WT1 665 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 ARHGAP18Q8N392 663 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 AOPEPQ8N6M6 819 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 SH3RF2Q8TEC5 729 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 TFAP2BQ92481 460 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 HSPBAP1Q96EW2 488 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZFYVE19Q96K21 471 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 HHIPQ96QV1 700 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 BPIFA3Q9BQP9 254 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 ORAI3Q9BRQ5 295 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 RNF38Q9H0F5 515 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 VPS16Q9H269 839 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 TBC1D17Q9HA65 648 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 LRRC4Q9HBW1 653 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 HEBP1Q9NRV9 189 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 GKN1Q9NS71 199 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 SMPD4Q9NXE4 827 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 DNAJC12Q9UKB3 198 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 CNTN6Q9UQ52 1028 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 MRPS17Q9Y2R5 130 aaKnown RBP6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 CPQQ9Y646 472 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 PIAS3Q9Y6X2 628 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 C5orf42Q9H799 3197 aa6.05□□□□□ -1.44
HMGB1P42-201ENST00000532126 NOTCH4Q99466 2003 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 KANSL1LA0AUZ9 987 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC22A31A6NKX4 558 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM170BA6NMN3 283 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SMTNL1A8MU46 457 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 BECN2A8MW95 431 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 LEFTY2O00292 366 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 TULP2O00295 520 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 COCHO43405 550 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 THAP12O43422 761 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 TLR5O60602 858 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZBED1O96006 694 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 B3GALT4O96024 378 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 CALCAP01258 141 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 RALAP11233 206 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 HSD3B1P14060 373 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 GLULP15104 373 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 CD72P21854 359 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 ATP5C1P36542 298 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 IFNAR2P48551 515 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 TKTL1P51854 596 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 COPB1P53618 953 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 VCPP55072 806 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 MLLT6P55198 1093 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 AMPD2Q01433 879 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 KCNMA1Q12791 1236 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SFSWAPQ12872 951 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 KLF1Q13351 362 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 RUNX3Q13761 415 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZNF460Q14592 562 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 MTF1Q14872 753 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 UBXN2BQ14CS0 331 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZNF77Q15935 545 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 ITPRIPL2Q3MIP1 535 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM133BQ5BKY9 247 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 RAB41Q5JT25 222 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 CWF19L1Q69YN2 538 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 RSRC2Q7L4I2 434 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 CCDC186Q7Z3E2 898 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 KRT77Q7Z794 578 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SCD5Q86SK9 330 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 TADA2BQ86TJ2 420 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 C11orf74Q86VG3 221 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SIX6OS1Q8N1H7 587 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 NKAPQ8N5F7 415 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 TMEM105Q8N8V8 129 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 LRRN4CLQ8ND94 238 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 OSCP1Q8WVF1 389 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 KCTD13Q8WZ19 329 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM3CQ92520 227 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 CCT6BQ92526 530 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SHC3Q92529 594 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 PTPRN2Q92932 1015 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SECISBP2LQ93073 1101 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 PPP1R14AQ96A00 147 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 MSANTD3Q96H12 275 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 NELL2Q99435 816 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM83CQ9BQN1 747 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZSWIM1Q9BR11 485 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 DDX23Q9BUQ8 820 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 LSM14BQ9BX40 385 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 GSX2Q9BZM3 304 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 FOXQ1Q9C009 403 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 EBF3Q9H4W6 596 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 C8orf33Q9H7E9 229 aaPredicted RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SIX2Q9NPC8 291 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 OSER1Q9NX31 292 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 DUS2Q9NX74 493 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 GTSE1Q9NYZ3 720 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 CLIC5Q9NZA1 410 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 CFAP97Q9P2B7 532 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms