RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 AKAP7Q9P0M2 348 aaPredicted RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 OSGIN2Q9Y236 505 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 PCDHGA3Q9Y5H0 932 aa7.26□□□□□ -1.25
VPS26B-204ENST00000527586 MRPS18BQ9Y676 258 aaKnown RBP7.26□□□□□ -1.25
VPS26B-204ENST00000527586 CITO14578 2027 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 TLN2Q9Y4G6 2542 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 F8VP50 259 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 HAX1O00165 279 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 TOM1L1O75674 476 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 CSF2P04141 144 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 YWHAQP27348 245 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 CDC27P30260 824 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 MATR3P43243 847 aaKnown RBP eCLIP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 RECQLP46063 649 aaPredicted RBP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 ITGA1P56199 1179 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 CYP27A1Q02318 531 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 C16orf72Q14CZ0 275 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 ARHGAP44Q17R89 818 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 SV2CQ496J9 727 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 SETMARQ53H47 684 aaPredicted RBP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 ESRP1Q6NXG1 681 aaKnown RBP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 FAM171BQ6P995 826 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 CLEC9AQ6UXN8 241 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 BNC2Q6ZN30 1099 aaPredicted RBP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 PARS2Q7L3T8 475 aaKnown RBP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 OSTM1Q86WC4 334 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 TMEM145Q8NBT3 493 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 CCDC148Q8NFR7 591 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 CHTF18Q8WVB6 975 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 NOX5Q96PH1 765 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 TSPAN18Q96SJ8 248 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 FOXC2Q99958 501 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 VPS54Q9P1Q0 977 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 GULP1Q9UBP9 304 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 ZBTB47Q9UFB7 747 aaPredicted RBP7.25□□□□□ -1.25
VPS26B-204ENST00000527586 L1RE1Q9UN81 338 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 POLHQ9Y253 713 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 B3GALT1Q9Y5Z6 326 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 RNF215Q9Y6U7 377 aa7.25□□□□□ -1.25
VPS26B-204ENST00000527586 TDRD6O60522 2096 aaKnown RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 GOLGA8AA7E2F4 631 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 GOLGA8BA8MQT2 603 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 SLC31A1O15431 190 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 CLDN3O15551 220 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 ZBTB43O43298 467 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 RNGTTO60942 597 aaKnown RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 SIN3BO75182 1162 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 TBX18O95935 607 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 FURINP09958 794 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 NME1P15531 152 aaKnown RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 MAP4P27816 1152 aaKnown RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 PCSK6P29122 969 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 NOP2P46087 812 aaKnown RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 NPTX2P47972 431 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 PSMD8P48556 350 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 TUBP50607 506 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 IST1P53990 364 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 PEX3P56589 373 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 MCL1Q07820 350 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 GOLGA8FQ08AF8 430 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 GOLGA8DPQ0D2H9 430 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 ERV3-1Q14264 604 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 TMEM132DQ14C87 1099 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 EFHC2Q5JST6 749 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 SLC6A19Q695T7 634 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 Q6ZNB5 142 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 TMEM135Q86UB9 458 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 FJX1Q86VR8 437 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 NLGN4XQ8N0W4 816 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 Q8N9G6 341 aaPredicted RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 NLGN4YQ8NFZ3 816 aaPredicted RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 OVCA2Q8WZ82 227 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 C8orf48Q96LL4 319 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 SLC25A23Q9BV35 468 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 TRIM55Q9BYV6 548 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 HAPLN2Q9GZV7 340 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 ORC3Q9UBD5 711 aaPredicted RBP7.24□□□□□ -1.25
VPS26B-204ENST00000527586 KLF15Q9UIH9 416 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 PILRAQ9UKJ1 303 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 PCDHB3Q9Y5E6 796 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 CUBNO60494 3623 aa7.24□□□□□ -1.25
VPS26B-204ENST00000527586 TGP01266 2768 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 ARHGEF35A5YM69 484 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 A6NCN8 305 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 DPM1O60762 260 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 HUS1O60921 280 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 FGF3P11487 239 aaPredicted RBP7.23□□□□□ -1.25
VPS26B-204ENST00000527586 PRLRP16471 622 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 JUNDP17535 347 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 PCSK1P29120 753 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 ADSLP30566 484 aaPredicted RBP7.23□□□□□ -1.25
VPS26B-204ENST00000527586 ADD1P35611 737 aaKnown RBP7.23□□□□□ -1.25
VPS26B-204ENST00000527586 ADKP55263 362 aaKnown RBP7.23□□□□□ -1.25
VPS26B-204ENST00000527586 CLDN2P57739 230 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 PSMC1P62191 440 aaKnown RBP7.23□□□□□ -1.25
VPS26B-204ENST00000527586 YBX1P67809 324 aaKnown RBP7.23□□□□□ -1.25
VPS26B-204ENST00000527586 C1orf61Q13536 156 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 FZD2Q14332 565 aa7.23□□□□□ -1.25
VPS26B-204ENST00000527586 ARID5BQ14865 1188 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms