RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 COPAP53621 1224 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RAB2AP61019 212 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CAMK2GQ13555 558 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CYP51A1Q16850 503 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 PDZK1Q5T2W1 519 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 ZNF57Q68EA5 555 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CAMKK1Q8N5S9 505 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 BLOC1S5Q8TDH9 187 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC9A7Q96T83 725 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 ILKAPQ9H0C8 392 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 ANKZF1Q9H8Y5 726 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 GSTM1P09488 218 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SP100P23497 879 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 GRK3P35626 688 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SOX11P35716 441 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 RBBP4Q09028 425 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 DNAJC3Q13217 504 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 ARMC4Q5T2S8 1044 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 ARHGEF19Q8IW93 802 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 ABRAQ8N0Z2 381 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 CCDC126Q96EE4 140 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 IL1RL2Q9HB29 575 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 V9GYQ6 96 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 A0A087WZ62 844 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 TIMM44O43615 452 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 MED26O95402 600 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 TCN1P20061 433 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SOX10P56693 466 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 PTPN11Q06124 597 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 C1QBPQ07021 282 aaKnown RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 LY6KQ17RY6 165 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 TTLL9Q3SXZ7 439 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 EARS2Q5JPH6 523 aaKnown RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC30A10Q6XR72 485 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 FAM9CQ8IZT9 166 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 TOR1AIP2Q8NFQ8 470 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 FDXACB1Q9BRP7 624 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 MAF1Q9H063 256 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 LRRC40Q9H9A6 602 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 TBCCD1Q9NVR7 557 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC25A13Q9UJS0 675 aa12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 PNMA8BQ9ULN7 279 aaPredicted RBP12.35□□□□□ -0.43
ERGIC1-208ENST00000520399 SF3B1O75533 1304 aaKnown RBP eCLIP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 SMIM22K7EJ46 135 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 THP07101 528 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 ENO2P09104 434 aaPredicted RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 PTPN7P35236 360 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 TYW3Q6IPR3 259 aaKnown RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 S100ZQ8WXG8 99 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 RERGLQ9H628 205 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 DYRK1BQ9Y463 629 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 CES2O00748 559 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 EPN2O95208 641 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 CXCL8P10145 99 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 MBL2P11226 248 aaPredicted RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 HSD3B2P26439 372 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 OXCT1P55809 520 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC5A9Q2M3M2 681 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 MCOLN2Q8IZK6 566 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 SPATC1LQ9H0A9 340 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 A0A087WXM4 84 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 TNFRSF21O75509 655 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 SLITRK3O94933 977 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 BMP10O95393 424 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 PSMD4P55036 377 aaKnown RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 XRCC4Q13426 336 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 CAMK1Q14012 370 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 POLD3Q15054 466 aaPredicted RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 C6orf183Q5T699 404 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 C9orf131Q5VYM1 1079 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 TMEM53Q6P2H8 277 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 IZUMO1Q8IYV9 350 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 C18orf25Q96B23 403 aaPredicted RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 PAFAH2Q99487 392 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 KCTD10Q9H3F6 313 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 DRG1Q9Y295 367 aaKnown RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 MYRFQ9Y2G1 1151 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 FRMPD4Q14CM0 1322 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 STAT5AP42229 794 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 PTDSS1P48651 473 aaKnown RBP12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 SLC12A3P55017 1021 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 NAA20P61599 178 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 GRIK4Q16099 956 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 DGUOKQ16854 277 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 ZSWIM7Q19AV6 140 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 OTOP1Q7RTM1 612 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 LRRC6Q86X45 466 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 OSCP1Q8WVF1 389 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 TMEM121Q9BTD3 319 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 NLNQ9BYT8 704 aa12.34□□□□□ -0.43
ERGIC1-208ENST00000520399 B3GAT3O94766 335 aa12.33□□□□□ -0.43
ERGIC1-208ENST00000520399 ITGA1P56199 1179 aa12.33□□□□□ -0.43
ERGIC1-208ENST00000520399 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.43
ERGIC1-208ENST00000520399 STK32CQ86UX6 486 aa12.33□□□□□ -0.43
ERGIC1-208ENST00000520399 ARID3BQ8IVW6 561 aaPredicted RBP12.33□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms