RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TPRP12270 2363 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 SUPT7LO94864 414 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 ITGALP20701 1170 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 ADORA2BP29275 332 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CDH4P55283 916 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 SHROOM1Q2M3G4 852 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 DCAF6Q58WW2 860 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 DNAJB8Q8NHS0 232 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 NAT14Q8WUY8 206 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 HPDLQ96IR7 371 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 ARID1AO14497 2285 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 C19orf81C9J6K1 198 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 PPIBP23284 216 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 SKP1P63208 163 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 FBXO42Q6P3S6 717 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 AHI1Q8N157 1196 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 PRDM8Q9NQV8 689 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 MED24O75448 989 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CLTBP09497 229 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 FOLH1Q04609 750 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 SNRNP48Q6IEG0 339 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 SWSAP1Q6NVH7 229 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 APOBEC3FQ8IUX4 373 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 COMMD9Q9P000 198 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 MRASO14807 208 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CYP1A2P05177 515 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CNPP09543 421 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 KIZQ2M2Z5 673 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 C15orf59Q2T9L4 293 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 ZC2HC1CQ53FD0 456 aaPredicted RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 NOTUMQ6P988 496 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 UBASH3BQ8TF42 649 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 CDRT15Q96T59 188 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 NUDT12Q9BQG2 462 aa8.53□□□□□ -1.04
HTT-208ENST00000510626 TSEN34Q9BSV6 310 aaKnown RBP8.53□□□□□ -1.04
HTT-208ENST00000510626 SETD1AO15047 1707 aaKnown RBP8.52□□□□□ -1.04
HTT-208ENST00000510626 KPNA5O15131 536 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 GLP2RO95838 553 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 GRK4P32298 578 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 CASP4P49662 377 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 HERC3Q15034 1050 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 CIAPIN1Q6FI81 312 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 ATG9AQ7Z3C6 839 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 SLC38A2Q96QD8 506 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 HOPXQ9BPY8 73 aaPredicted RBP8.52□□□□□ -1.04
HTT-208ENST00000510626 SPASTQ9UBP0 616 aa8.52□□□□□ -1.04
HTT-208ENST00000510626 F5H6K3 240 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 KCNH1O95259 989 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 SDC2P34741 201 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 KLRC3Q07444 240 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 CDH17Q12864 832 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 PLCL1Q15111 1095 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 PTCD2Q8WV60 388 aaKnown RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 GLS2Q9UI32 602 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 INPP5FQ9Y2H2 1132 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 CAPN6Q9Y6Q1 641 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 CHST10O43529 356 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 ZNF682O95780 498 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 FDPSP14324 419 aaKnown RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 F8A1P23610 371 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 PCBP1Q15365 356 aaKnown RBP eCLIP8.52□□□□□ -1.05
HTT-208ENST00000510626 BTN2A2Q8WVV5 523 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 ISCA1Q9BUE6 129 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 SLC6A15Q9H2J7 730 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 CNTNAP5Q8WYK1 1306 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 CBX6O95503 412 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 TDP2O95551 362 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 PSMD5Q16401 504 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 RIPOR1Q6ZS17 1223 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 ZNF572Q7Z3I7 529 aaPredicted RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 IRGQQ8WZA9 623 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 IQGAP1P46940 1657 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 ISPDA4D126 451 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 SIN3BO75182 1162 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 PLEKP08567 350 aaPredicted RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 PIK3CBP42338 1070 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 KCNJ1P48048 391 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 PTPRNQ16849 979 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 GANCQ8TET4 914 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 JMJD4Q9H9V9 463 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 LRRC4BQ9NT99 713 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 RNF146Q9NTX7 359 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 NUDT5Q9UKK9 219 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 MTF2Q9Y483 593 aaPredicted RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 CLDN25C9JDP6 229 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 ALOX15P16050 662 aaPredicted RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 ATP13A5Q4VNC0 1218 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 MCOLN2Q8IZK6 566 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 SPERTQ8NA61 448 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 BHLHE22Q8NFJ8 381 aaPredicted RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 CAPSLQ8WWF8 208 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 CDCA5Q96FF9 252 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 RBM4BQ9BQ04 359 aaKnown RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 RBM4Q9BWF3 364 aaKnown RBP8.52□□□□□ -1.05
HTT-208ENST00000510626 GPR63Q9BZJ6 419 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 LRRC19Q9H756 370 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 PROCP04070 461 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 LCP1P13796 627 aa8.52□□□□□ -1.05
HTT-208ENST00000510626 GYS1P13807 737 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms