RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 FASTKQ14296 549 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 CRELD2Q6UXH1 353 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 ZNF398Q8TD17 642 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 SHC3Q92529 594 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 CELF6Q96J87 481 aaKnown RBP16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 GAD1Q99259 594 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 ZNF184Q99676 751 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 NMRAL1Q9HBL8 299 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 POPDC2Q9HBU9 364 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 SNCAIPQ9Y6H5 919 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 PEAK1Q9H792 1746 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 MEI4A8MW99 385 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 SERPINF2P08697 491 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 DEFB115Q30KQ5 88 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 PGBD3Q8N328 593 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 OR6Y1Q8NGX8 325 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.235e-8■■■■■ 44.4
HMGXB3-202ENST00000503427 BHMTQ93088 406 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 PHF21BQ96EK2 531 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 SNTNA6NMZ2 147 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 GSNP06396 782 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 RGMBQ6NW40 437 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 UROC1Q96N76 676 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 ETNK2Q9NVF9 386 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 NDUFAF1Q9Y375 327 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 TSC22D4Q9Y3Q8 395 aa16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 ASTN2O75129 1339 aaPredicted RBP16.48■□□□□ 0.23
HMGXB3-202ENST00000503427 ERI2A8K979 691 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 PSMG1O95456 288 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 MLNP12872 115 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 ALOX15P16050 662 aaPredicted RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 TUFMP49411 452 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 ANXA11P50995 505 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 RHOAP61586 193 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 NR6A1Q15406 480 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 RIPOR1Q6ZS17 1223 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 PLEKHM3Q6ZWE6 761 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 KIAA0319LQ8IZA0 1049 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 FAM120BQ96EK7 910 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 RMND5BQ96G75 393 aaPredicted RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 BDH2Q9BUT1 245 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 PLIN4Q96Q06 1357 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 E5RJQ4 531 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 DCXO43602 365 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 FAM98BQ52LJ0 330 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 GLMNQ92990 594 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 NSMCE2Q96MF7 247 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 MRASO14807 208 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 RRM2P31350 389 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 SOX6P35712 828 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 MRPS6P82932 125 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 PARP6Q2NL67 630 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 ZACNQ401N2 412 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 ZCCHC23Q6ZST2 131 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 SNX32Q86XE0 403 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 ALLCQ8N6M5 410 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 HSFY1Q96LI6 401 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 RABGEF1Q9UJ41 708 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 ITM2BQ9Y287 266 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 YDJCA8MPS7 323 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 RAMP2O60895 175 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 KRT75O95678 551 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 LTFP02788 710 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 RETSATQ6NUM9 610 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 LPCAT2Q7L5N7 544 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 TSPAN18Q96SJ8 248 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 TTLL13PA6NNM8 815 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 KCNK1O00180 336 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 PPP1R11O60927 126 aaPredicted RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 VAPBO95292 243 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 IFNA14P01570 189 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 HOXB8P17481 243 aaPredicted RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 MARSP56192 900 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 SFSWAPQ12872 951 aaKnown RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 BTG3Q14201 252 aaPredicted RBP16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 ZNF470Q6ECI4 717 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 CXCL17Q6UXB2 119 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 IRF2BP2Q7Z5L9 587 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 PRDM4Q9UKN5 801 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 TMCC3Q9ULS5 477 aa16.47■□□□□ 0.23
HMGXB3-202ENST00000503427 NID2Q14112 1375 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 MT-CO1P00395 513 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 COL9A3Q14050 684 aaPredicted RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 PRCCQ92733 491 aaPredicted RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 ASB2Q96Q27 587 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 SLC25A23Q9BV35 468 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 ELOVL6Q9H5J4 265 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 REXO2Q9Y3B8 237 aaKnown RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 DRD4P21917 467 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 TRAF2Q12933 501 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 MAD2L1Q13257 205 aaPredicted RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 MSLNQ13421 630 aaPredicted RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 FBXO39Q8N4B4 442 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 CDRT15Q96T59 188 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 TMEM39AQ9NV64 488 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 TRIM17Q9Y577 477 aa16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 PRR23D1E9PI22 279 aaPredicted RBP16.46■□□□□ 0.23
HMGXB3-202ENST00000503427 PROCP04070 461 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms