RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 MOCS3O95396 460 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 ASLP04424 464 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 SERPING1P05155 500 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 CD70P32970 193 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 WASP42768 502 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 PLK1P53350 603 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 ATP11AP98196 1134 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 LMAN2Q12907 356 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 SRSF5Q13243 272 aaKnown RBP12.76□□□□□ -0.37
MRPL55-233ENST00000495899 TRIM14Q14142 442 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF234Q14588 700 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 ARL13BQ3SXY8 428 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 E4F1Q66K89 784 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-233ENST00000495899 MBLAC2Q68D91 279 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 SPECC1LQ69YQ0 1117 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 DNAJC24Q6P3W2 148 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 WDR59Q6PJI9 974 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 LRRC31Q6UY01 552 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 VPS36Q86VN1 386 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 DRC7Q8IY82 874 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 CCAR2Q8N163 923 aaKnown RBP12.76□□□□□ -0.37
MRPL55-233ENST00000495899 KDM1BQ8NB78 822 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 JOSD2Q8TAC2 188 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 WFDC5Q8TCV5 224 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 LOXL4Q96JB6 756 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 RPRD1AQ96P16 312 aaPredicted RBP12.76□□□□□ -0.37
MRPL55-233ENST00000495899 SIK2Q9H0K1 926 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 TMEM245Q9H330 911 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 PARVAQ9NVD7 372 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
MRPL55-233ENST00000495899 WDR87Q6ZQQ6 2873 aa12.76□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 DRGXA6NNA5 263 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 WASH3PC4AMC7 463 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 I6L893 689 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 DDX3XO00571 662 aaKnown RBP eCLIP12.75□□□□□ -0.373e-7■■■■□ 21.3
MRPL55-233ENST00000495899 SYNCRIPO60506 623 aaKnown RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 RTN2O75298 545 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF217O75362 1048 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 FRYLO94915 3013 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 FTLP02792 175 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 GYPCP04921 128 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 RETP07949 1114 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 SKILP12757 684 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 DESP17661 470 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 GABRG2P18507 467 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 GPD1P21695 349 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 RRM1P23921 792 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 HNRNPH3P31942 346 aaKnown RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 ADRA1BP35368 520 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 IL12RB1P42701 662 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF143P52747 638 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 CDH4P55283 916 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF177Q13360 481 aaPredicted RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 PTPRNQ16849 979 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 FUT11Q495W5 492 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 FSCBQ5H9T9 825 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 HGSNATQ68CP4 663 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 SERPINA13PQ6UXR4 307 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 PRR23BQ6ZRT6 265 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 FAM131BQ86XD5 332 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 ZNF683Q8IZ20 524 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 PGBD3Q8N328 593 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 GPR161Q8N6U8 529 aaKnown RBP12.75□□□□□ -0.37
MRPL55-233ENST00000495899 RNF214Q8ND24 703 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 HMGB4Q8WW32 186 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 SORCS1Q8WY21 1168 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 IGSF8Q969P0 613 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 TRIM11Q96F44 468 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 CNPY3Q9BT09 278 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 ISCUQ9H1K1 167 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 RETREG1Q9H6L5 497 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 ANLNQ9NQW6 1124 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 TAS2R14Q9NYV8 317 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 NCDNQ9UBB6 729 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 GMEB2Q9UKD1 530 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 VANGL2Q9ULK5 521 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 TBC1D30Q9Y2I9 924 aa12.75□□□□□ -0.37
MRPL55-233ENST00000495899 MYOFQ9NZM1 2061 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 USP34Q70CQ2 3546 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 IGLV3-10A0A075B6K4 115 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 TMCO5BA8MYB1 307 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 LRP3O75074 770 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 RHOBTB1O94844 696 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 SRPRAP08240 638 aaKnown RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 MYBL1P10243 752 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 CASP14P31944 242 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 P2RY2P41231 377 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 CSKP41240 450 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 ATXN1P54253 815 aaKnown RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 ST8SIA6P61647 398 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 NRG1Q02297 640 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 SULT2A1Q06520 285 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 MAMLD1Q13495 774 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 ARID5BQ14865 1188 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 ELF2Q15723 593 aa12.74□□□□□ -0.37
MRPL55-233ENST00000495899 C15orf59Q2T9L4 293 aaPredicted RBP12.74□□□□□ -0.37
MRPL55-233ENST00000495899 FNDC3BQ53EP0 1204 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms