RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 NTSR1P30989 418 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 EPHB1P54762 984 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 RPS16P62249 146 aaKnown RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 FMO1Q01740 532 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 DCTN1Q14203 1278 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 PLAG1Q6DJT9 500 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 SULT6B1Q6IMI4 303 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 ZNF530Q6P9A1 599 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 MORC1Q86VD1 984 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 PELI3Q8N2H9 469 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 WIPF2Q8TF74 440 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 IPCEF1Q8WWN9 437 aaPredicted RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 SLC25A28Q96A46 364 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 RUNDC1Q96C34 613 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 TRMT61AQ96FX7 289 aaKnown RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 ZDHHC12Q96GR4 267 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 CAMK1GQ96NX5 476 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 FCRL5Q96RD9 977 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 SYT17Q9BSW7 474 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 THUMPD2Q9BTF0 503 aaKnown RBP3.74□□□□□ -1.81
PTCD3-218ENST00000493430 CHST8Q9H2A9 424 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 ZNF112Q9UJU3 913 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 MID2Q9UJV3 735 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 ITGB1BP2Q9UKP3 347 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 COL4A5P29400 1685 aa3.74□□□□□ -1.81
PTCD3-218ENST00000493430 ECM29Q5VYK3 1845 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 hCG_2014768A0A024R1R8 64 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 RRHO14718 337 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 SYF2O95926 243 aaKnown RBP3.73□□□□□ -1.81
PTCD3-218ENST00000493430 TMIGD3P0DMS9 266 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-218ENST00000493430 IL1R1P14778 569 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 TNFRSF1BP20333 461 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 YY1P25490 414 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 GALNSP34059 522 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 COPAP53621 1224 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 CACNB3P54284 484 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 SLC12A2P55011 1212 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 WDR5P61964 334 aaKnown RBP3.73□□□□□ -1.81
PTCD3-218ENST00000493430 DNASE1L3Q13609 305 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 CXorf57Q6NSI4 855 aaKnown RBP3.73□□□□□ -1.81
PTCD3-218ENST00000493430 P3H2Q8IVL5 708 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 FSTL5Q8N475 847 aaPredicted RBP3.73□□□□□ -1.81
PTCD3-218ENST00000493430 STAG1Q8WVM7 1258 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 PIGKQ92643 395 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 ZPBPQ9BS86 351 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 TUBB6Q9BUF5 446 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 LRRC27Q9C0I9 530 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 VPS33BQ9H267 617 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 FAM204AQ9H8W3 233 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 ZNF287Q9HBT7 754 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 TMEM8AQ9HCN3 771 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 C1orf112Q9NSG2 853 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 COL20A1Q9P218 1284 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 OGDHLQ9ULD0 1010 aa3.73□□□□□ -1.81
PTCD3-218ENST00000493430 C10orf71Q711Q0 1435 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 ATP10DQ9P241 1426 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 ANKRD62A6NC57 917 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 PRSS44E7EML9 344 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 GTPBP1O00178 669 aaKnown RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 FOXN3O00409 490 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 RPS6KB1P23443 525 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 CDC25AP30304 524 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 ALDH7A1P49419 539 aaKnown RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 DDR1Q08345 913 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 KCNAB1Q14722 419 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 MTHFSDQ2M296 383 aaKnown RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 MINDY4Q4G0A6 757 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 MANEALQ5VSG8 457 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 DLK2Q6UY11 383 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 UNC13DQ70J99 1090 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 B4GALNT4Q76KP1 1039 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 SKAP1Q86WV1 359 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 ADHFE1Q8IWW8 467 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 P2RY11Q96G91 374 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 CTAGE1Q96RT6 745 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 AGO4Q9HCK5 861 aaKnown RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 VPS45Q9NRW7 570 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 DECR2Q9NUI1 292 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 TMOD3Q9NYL9 352 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 VPS51Q9UID3 782 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 CAPN11Q9UMQ6 739 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 HPSEQ9Y251 543 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 HEMK1Q9Y5R4 338 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 SIRT4Q9Y6E7 314 aaPredicted RBP3.72□□□□□ -1.81
PTCD3-218ENST00000493430 CDK5RAP2Q96SN8 1893 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 COL15A1P39059 1388 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 ZSWIM8A7E2V4 1837 aa3.72□□□□□ -1.81
PTCD3-218ENST00000493430 OTOFQ9HC10 1997 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 SLC22A23A1A5C7 686 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 EME2A4GXA9 379 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 F8W810 466 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 CTIFO43310 598 aaKnown RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 TLX3O43711 291 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 MAP4K4O95819 1239 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-218ENST00000493430 FGF2P09038 288 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 TGFB3P10600 412 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 MYF5P13349 255 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 CHRNA5P30532 468 aa3.71□□□□□ -1.82
PTCD3-218ENST00000493430 HOXA7P31268 230 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms