RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	CDC20	Q12834	499 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	MAPK7	Q13164	816 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	TRIM29	Q14134	588 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	SMTNL2	Q2TAL5	461 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	SETMAR	Q53H47	684 aa	Predicted RBP	5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	SCARA3	Q6AZY7	606 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	TAOK1	Q7L7X3	1001 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	XYLT1	Q86Y38	959 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	AADAT	Q8N5Z0	425 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	ZNF548	Q8NEK5	533 aa	Predicted RBP	5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	OR13H1	Q8NG92	308 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	KBTBD7	Q8WVZ9	684 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	PTPRN2	Q92932	1015 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	KCNB2	Q92953	911 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	GLMN	Q92990	594 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	KCNK16	Q96T55	309 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	IL12RB2	Q99665	862 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	CMKLR1	Q99788	373 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	EPAS1	Q99814	870 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	AGXT2	Q9BYV1	514 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC2A11	Q9BYW1	496 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	ZNF518B	Q9C0D4	1074 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	ELOVL4	Q9GZR5	314 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	GDAP2	Q9NXN4	497 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	RRN3	Q9NYV6	651 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	KCNG1	Q9UIX4	513 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	NUDT5	Q9UKK9	219 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	KIAA1024	Q9UPX6	916 aa		5.61	□□□□□ -1.51
SEC13-219	ENST00000492602	MYH11	P35749	1972 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	NBEAL1	Q6ZS30	2694 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602		A0A1W2PQM1	296 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	TARSL2	A2RTX5	802 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602		E9PMD0	336 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602		H3BM21	787 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CLDN5	O00501	218 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC31A1	O15431	190 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CAPN5	O15484	640 aa	Predicted RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	AQP9	O43315	295 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	JAK2	O60674	1132 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	RNGTT	O60942	597 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	STC2	O76061	302 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	KLKB1	P03952	638 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	RPLP0	P05388	317 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ATP5B	P06576	529 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	DLD	P09622	509 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	PLS3	P13797	630 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	MUT	P22033	750 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ITGB7	P26010	798 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	UGT1A3	P35503	534 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CCT6A	P40227	531 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	PLA2G4A	P47712	749 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	FXR2	P51116	673 aa	Known RBP eCLIP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	COPB1	P53618	953 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ST8SIA6	P61647	398 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CCL7	P80098	99 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	NR5A1	Q13285	461 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	INPP5J	Q15735	1006 aa	Predicted RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	NADK2	Q4G0N4	442 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	PRR30	Q53SZ7	412 aa	Predicted RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ATP1A1-AS1	Q5TC04	95 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CEP135	Q66GS9	1140 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	HAUS3	Q68CZ6	603 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	MBLAC2	Q68D91	279 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ADAL	Q6DHV7	355 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	RINT1	Q6NUQ1	792 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	C16orf46	Q6P387	395 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ADIPOR2	Q86V24	386 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC35F3	Q8IY50	421 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CACNA2D3	Q8IZS8	1091 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	AHI1	Q8N157	1196 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC22A18AS	Q8N1D0	253 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	SDR16C5	Q8N3Y7	309 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	KCTD17	Q8N5Z5	321 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CSGALNACT2	Q8N6G5	542 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	LRRC52	Q8N7C0	313 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	C1orf127	Q8N9H9	656 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	SPATA3	Q8NHX4	192 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	LMX1A	Q8TE12	382 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	WFIKKN2	Q8TEU8	576 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	KLK6	Q92876	244 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	TMEM159	Q96B96	161 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	IFT43	Q96FT9	208 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ZNF274	Q96GC6	653 aa	Predicted RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	SLC45A3	Q96JT2	553 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	RUSC1	Q9BVN2	902 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	MFRP	Q9BY79	579 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CPEB1	Q9BZB8	566 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CDH19	Q9H159	772 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	TMEM60	Q9H2L4	133 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	FZD3	Q9NPG1	666 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	TLR8	Q9NR97	1041 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ABCB8	Q9NUT2	735 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	DDX19A	Q9NUU7	478 aa	Known RBP	5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	PADI4	Q9UM07	663 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	ZNF510	Q9Y2H8	683 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	CSNK1G3	Q9Y6M4	447 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	SHANK1	Q9Y566	2161 aa		5.6	□□□□□ -1.51
SEC13-219	ENST00000492602	MN1	Q10571	1320 aa	Predicted RBP	5.59	□□□□□ -1.51
SEC13-219	ENST00000492602	TPP1	O14773	563 aa		5.59	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms