RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 SLC18A1P54219 525 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 SLC6A3Q01959 620 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 RBBP5Q15291 538 aaKnown RBP13.69□□□□□ -0.22
CHD1L-208ENST00000488864 RCN1Q15293 331 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 PPP1R15BQ5SWA1 713 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 NKX2-4Q9H2Z4 354 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 ETAA1Q9NY74 926 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 WDR35Q9P2L0 1181 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 USTQ9Y2C2 406 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 PTPRDP23468 1912 aa13.69□□□□□ -0.22
CHD1L-208ENST00000488864 C5orf42Q9H799 3197 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 CARNS1A5YM72 827 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 SEC24AO95486 1093 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 KRT10P13645 584 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 ADRA1DP25100 572 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 VHLP40337 213 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 RPL34P49207 117 aaKnown RBP13.68□□□□□ -0.22
CHD1L-208ENST00000488864 ZNF252P-AS1Q0IIN9 211 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 ATP13A4Q4VNC1 1196 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 ACSBG2Q5FVE4 666 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 SNX30Q5VWJ9 437 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 FOXB2Q5VYV0 432 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 HFE2Q6ZVN8 426 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 ZNF461Q8TAF7 563 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 SPPL2BQ8TCT7 592 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 GIPC2Q8TF65 315 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 KCTD13Q8WZ19 329 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.228e-8■■■□□ 17.5
CHD1L-208ENST00000488864 CYP4F11Q9HBI6 524 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 PCDHA11Q9Y5I1 949 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.68□□□□□ -0.22
CHD1L-208ENST00000488864 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.68□□□□□ -0.22
CHD1L-208ENST00000488864 YJEFN3A6XGL0 299 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 PI4K2BG5E9Z4 385 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 DNALI1O14645 258 aaPredicted RBP13.68□□□□□ -0.22
CHD1L-208ENST00000488864 LILRB3O75022 631 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 PROSCO94903 275 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 CAMK1Q14012 370 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 KPNB1Q14974 876 aaKnown RBP13.68□□□□□ -0.22
CHD1L-208ENST00000488864 EFTUD2Q15029 972 aaKnown RBP eCLIP13.68□□□□□ -0.222e-6■■■□□ 18.3
CHD1L-208ENST00000488864 CCDC6Q16204 474 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 CDO1Q16878 200 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 KAZNQ674X7 775 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 IRGCQ6NXR0 463 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
CHD1L-208ENST00000488864 SAR1AQ9NR31 198 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 STOML1Q9UBI4 398 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 DNPEPQ9ULA0 475 aa13.68□□□□□ -0.22
CHD1L-208ENST00000488864 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 GSC2O15499 205 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
CHD1L-208ENST00000488864 KRT4P19013 534 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 SSR1P43307 286 aaKnown RBP13.67□□□□□ -0.22
CHD1L-208ENST00000488864 SNX16P57768 344 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 USP46P62068 366 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 MRPS5P82675 430 aaKnown RBP13.67□□□□□ -0.22
CHD1L-208ENST00000488864 RCN2Q14257 317 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 RAB6CQ53S08 254 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 RAB41Q5JT25 222 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 SH3PXD2AQ5TCZ1 1133 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 RINLQ6ZS11 566 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 MFN1Q8IWA4 741 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 ZNF276Q8N554 614 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 ARNTL2Q8WYA1 636 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 PTCD3Q96EY7 689 aaKnown RBP13.67□□□□□ -0.22
CHD1L-208ENST00000488864 IFT43Q96FT9 208 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 OXCT2Q9BYC2 517 aaPredicted RBP13.67□□□□□ -0.22
CHD1L-208ENST00000488864 RAB6CQ9H0N0 254 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 TLR9Q9NR96 1032 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 RPL26L1Q9UNX3 145 aaKnown RBP13.67□□□□□ -0.22
CHD1L-208ENST00000488864 TRIOBPQ9H2D6 2365 aa13.67□□□□□ -0.22
CHD1L-208ENST00000488864 TNFRSF10BO14763 440 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 ZBED1O96006 694 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 HAPLN1P10915 354 aaPredicted RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 TCF4P15884 667 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 PDGFRAP16234 1089 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 ATF6P18850 670 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 TFE3P19532 575 aaPredicted RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 PSMA2P25787 234 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 PGFP49763 221 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 ROR2Q01974 943 aaKnown RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 C15orf59Q2T9L4 293 aaPredicted RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 SPDYAQ5MJ70 313 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 PPP2R2DQ66LE6 453 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 ANKMY2Q8IV38 441 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 ZBED8Q8IZ13 594 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 GALNT15Q8N3T1 639 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 DTX3LQ8TDB6 740 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 WDR60Q8WVS4 1066 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 RXFP2Q8WXD0 754 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 C11orf84Q9BUA3 381 aaPredicted RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 HEY2Q9UBP5 337 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 AFF4Q9UHB7 1163 aaKnown RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 MAGED2Q9UNF1 606 aaPredicted RBP13.66□□□□□ -0.22
CHD1L-208ENST00000488864 RWDD3Q9Y3V2 267 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 C5orf67F2Z3F1 127 aa13.66□□□□□ -0.22
CHD1L-208ENST00000488864 PRRG1O14668 218 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms