RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ASTN1O14525 1302 aa5.41□□□□□ -1.54
BRCA1-217ENST00000487825 CGB1A6NKQ9 187 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 H3BNC9 293 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 DCLK1O15075 740 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 DNAJB5O75953 348 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 UNC5CO95185 931 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 HNRNPCP07910 306 aaKnown RBP eCLIP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 SUPT20HL2P0C7V6 817 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 JUPP14923 745 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 NDUFB7P17568 137 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 DRD4P21917 467 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 SOX8P57073 446 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 SP2Q02086 613 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 CALD1Q05682 793 aaKnown RBP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 HNRNPA0Q13151 305 aaKnown RBP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 ACVR2BQ13705 512 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 ZNF267Q14586 743 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 LONRF3Q496Y0 759 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 EPC2Q52LR7 807 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 IFIT1BQ5T764 474 aaKnown RBP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 TATDN1Q6P1N9 297 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 LAYNQ6UX15 382 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 ZNF551Q7Z340 670 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 MAVSQ7Z434 540 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 TEX11Q8IYF3 940 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 MAGEB6Q8N7X4 407 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 ATRIPQ8WXE1 791 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 HPS3Q969F9 1004 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 CDK5RAP3Q96JB5 506 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 FTOQ9C0B1 505 aaKnown RBP eCLIP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 BRINP2Q9C0B6 783 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 ABHD16BQ9H3Z7 469 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 TCF7L1Q9HCS4 588 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 SERTAD4Q9NUC0 356 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 TRMT13Q9NUP7 481 aaKnown RBP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 C9orf78Q9NZ63 289 aaPredicted RBP5.4□□□□□ -1.54
BRCA1-217ENST00000487825 CD207Q9UJ71 328 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 SERTAD3Q9UJW9 196 aa5.4□□□□□ -1.54
BRCA1-217ENST00000487825 PLXNA4Q9HCM2 1894 aa5.4□□□□□ -1.55
BRCA1-217ENST00000487825 SMG1Q96Q15 3661 aaKnown RBP5.4□□□□□ -1.55
BRCA1-217ENST00000487825 FLT1P17948 1338 aa5.4□□□□□ -1.55
BRCA1-217ENST00000487825 WIPF3A6NGB9 483 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 DNAJC9-AS1A6NH13 148 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 CLCN2P51788 898 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 LILRA4P59901 499 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 PSMC6P62333 389 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 HYAL1Q12794 435 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 ICE2Q659A1 982 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 TLK2Q86UE8 772 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 ANKRD44Q8N8A2 993 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 SMRP1Q8NCR6 262 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 NSUN4Q96CB9 384 aaKnown RBP5.39□□□□□ -1.55
BRCA1-217ENST00000487825 MSLNLQ96KJ4 702 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 NELL2Q99435 816 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 NUP88Q99567 741 aaPredicted RBP5.39□□□□□ -1.55
BRCA1-217ENST00000487825 CGRRF1Q99675 332 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 SLC29A3Q9BZD2 475 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 BICC1Q9H694 974 aaKnown RBP5.39□□□□□ -1.55
BRCA1-217ENST00000487825 SARS2Q9NP81 518 aaKnown RBP5.39□□□□□ -1.55
BRCA1-217ENST00000487825 ADAMTS5Q9UNA0 930 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.39□□□□□ -1.55
BRCA1-217ENST00000487825 DENND4AQ7Z401 1863 aa5.39□□□□□ -1.55
BRCA1-217ENST00000487825 MYH4Q9Y623 1939 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 BPTFQ12830 3046 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 EYA2O00167 538 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 AP1G1O43747 822 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 OFD1O75665 1012 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 ALDH1L1O75891 902 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 FLOT1O75955 427 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 NXPH3O95157 252 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 PRKCGP05129 697 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 GRPP07492 148 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 LDHCP07864 332 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 FAM163BP0C2L3 166 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 NBPF7P0C2Y1 421 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 PCSK6P29122 969 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 COPB2P35606 906 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 LIPAP38571 399 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 PXNP49023 591 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 ALDH9A1P49189 494 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 ATXN1P54253 815 aaKnown RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 GSTO1P78417 241 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 HTRA4P83105 476 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 GPM6BQ13491 265 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 GPNMBQ14956 572 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 IQCB1Q15051 598 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 TWISTNBQ3B726 338 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 ATAT1Q5SQI0 421 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 ZNF618Q5T7W0 954 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 ARHGAP40Q5TG30 622 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 EMC10Q5UCC4 262 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 ATF7IPQ6VMQ6 1270 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 MTFMTQ96DP5 389 aaKnown RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 PHF7Q9BWX1 381 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 SH3BP4Q9P0V3 963 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 RNF7Q9UBF6 113 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 PATJQ8NI35 1801 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 MIA3Q5JRA6 1907 aa5.38□□□□□ -1.55
BRCA1-217ENST00000487825 GREB1LQ9C091 1923 aaPredicted RBP5.38□□□□□ -1.55
BRCA1-217ENST00000487825 RALGAPA1Q6GYQ0 2036 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms