RNA–Protein interactions for RNA: ENST00000480340.1

DENND4B-208, Transcript of DENN domain containing 4B, humanhuman

TSL 2

Gene DENND4B, Length 2,530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-208ENST00000480340 IFT43Q96FT9 208 aa14.53□□□□□ -0.08
DENND4B-208ENST00000480340 PRR11Q96HE9 360 aaPredicted RBP14.53□□□□□ -0.08
DENND4B-208ENST00000480340 CADM1Q9BY67 442 aaKnown RBP14.53□□□□□ -0.08
DENND4B-208ENST00000480340 OXCT2Q9BYC2 517 aaPredicted RBP14.53□□□□□ -0.08
DENND4B-208ENST00000480340 C12orf65Q9H3J6 166 aaKnown RBP14.53□□□□□ -0.08
DENND4B-208ENST00000480340 A0A1B0GVG6 124 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 CARNS1A5YM72 827 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 PI4K2BG5E9Z4 385 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SMAPO00193 183 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 DPYSL4O14531 572 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 DAB1O75553 588 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 PIAS1O75925 651 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 DCTN3O75935 186 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 MAGEA11P43364 429 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 PITX1P78337 314 aaPredicted RBP14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SLC25A11Q02978 314 aaKnown RBP14.52□□□□□ -0.08
DENND4B-208ENST00000480340 KLF1Q13351 362 aaPredicted RBP14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SPARCL1Q14515 664 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 MUM1Q2TAK8 710 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SYPL2Q5VXT5 272 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 FAM109BQ6ICB4 259 aaPredicted RBP14.52□□□□□ -0.08
DENND4B-208ENST00000480340 IRGCQ6NXR0 463 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SCYL2Q6P3W7 929 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 NLRP9Q7RTR0 991 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SPRED2Q7Z698 418 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 FAM81AQ8TBF8 368 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SP7Q8TDD2 431 aaPredicted RBP14.52□□□□□ -0.08
DENND4B-208ENST00000480340 RBM41Q96IZ5 413 aaKnown RBP14.52□□□□□ -0.08
DENND4B-208ENST00000480340 TRAPPC9Q96Q05 1148 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 NPHS2Q9NP85 383 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SAYSD1Q9NPB0 183 aa14.52□□□□□ -0.08
DENND4B-208ENST00000480340 SYNJ2BP-COX16A0A087WUM0 186 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 TRAFD1O14545 582 aaPredicted RBP14.52□□□□□ -0.09
DENND4B-208ENST00000480340 CAPN9O14815 690 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 KRT36O76013 467 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 LTFP02788 710 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 ZSCAN5DPP0CG00 497 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 CTNNB1P35222 781 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 MATKP42679 507 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 ATXN1P54253 815 aaKnown RBP14.52□□□□□ -0.09
DENND4B-208ENST00000480340 POLE2P56282 527 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 ACAP1Q15027 740 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 HADHQ16836 314 aaKnown RBP14.52□□□□□ -0.09
DENND4B-208ENST00000480340 P3H1Q32P28 736 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 BHLHA9Q7RTU4 235 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 EDEM1Q92611 657 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 C8orf48Q96LL4 319 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 TBCBQ99426 244 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 TLE6Q9H808 572 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 POPDC2Q9HBU9 364 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 MRPL17Q9NRX2 175 aaKnown RBP14.52□□□□□ -0.09
DENND4B-208ENST00000480340 COX16Q9P0S2 106 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 ZFP69BQ9UJL9 534 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 USP18Q9UMW8 372 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 USP3Q9Y6I4 520 aa14.52□□□□□ -0.09
DENND4B-208ENST00000480340 PLXNA3P51805 1871 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 NVLO15381 856 aaKnown RBP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 PRPF4O43172 522 aaKnown RBP eCLIP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 KRT1P04264 644 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 FYNP06241 537 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 HAPLN1P10915 354 aaPredicted RBP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 ETS1P14921 441 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 PTPN4P29074 926 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 SULT1E1P49888 294 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 CAV1Q03135 178 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 SMARCB1Q12824 385 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 OVGP1Q12889 678 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 SHHQ15465 462 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 RASIP1Q5U651 963 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 PM20D1Q6GTS8 502 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 RGS9BPQ6ZS82 235 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 ARCQ7LC44 396 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 NUP93Q8N1F7 819 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 RFWD2Q8NHY2 731 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 LRRC8CQ8TDW0 803 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 PEBP4Q96S96 227 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 MAK16Q9BXY0 300 aaKnown RBP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 ALG13Q9NP73 1137 aaKnown RBP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 PCMTD2Q9NV79 361 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 LMCD1Q9NZU5 365 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 NR2E3Q9Y5X4 410 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 WDR91A4D1P6 747 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 BANF1O75531 89 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 TRUB2O95900 331 aaKnown RBP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 NCAM1P13591 858 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 DESP17661 470 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 KRT15P19012 456 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 CA4P22748 312 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 KLRC2P26717 231 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 NOS2P35228 1153 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 PTPN9P43378 593 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 RANBP1P43487 201 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 USP46P62068 366 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 DYNC1I2Q13409 638 aaKnown RBP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 ACSBG2Q5FVE4 666 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 SYDE1Q6ZW31 735 aaPredicted RBP14.51□□□□□ -0.09
DENND4B-208ENST00000480340 KATNAL2Q8IYT4 538 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 GIPC2Q8TF65 315 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 GRK7Q8WTQ7 553 aa14.51□□□□□ -0.09
DENND4B-208ENST00000480340 CCDC77Q9BR77 488 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms