RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 BPTFQ12830 3046 aa17.3■□□□□ 0.36
TRIM13-208ENST00000478111 ITIH6Q6UXX5 1313 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 A0A1W2PPC4 97 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 MID1O15344 667 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
TRIM13-208ENST00000478111 PCDHGA12O60330 932 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 MOCS2O96007 188 aaPredicted RBP17.29■□□□□ 0.36
TRIM13-208ENST00000478111 SRPRAP08240 638 aaKnown RBP17.29■□□□□ 0.36
TRIM13-208ENST00000478111 ST8SIA6P61647 398 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 PITX1P78337 314 aaPredicted RBP17.29■□□□□ 0.36
TRIM13-208ENST00000478111 SUZ12Q15022 739 aaKnown RBP17.29■□□□□ 0.36
TRIM13-208ENST00000478111 CST6Q15828 149 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 MEA1Q16626 185 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 ZC3H12AQ5D1E8 599 aaKnown RBP17.29■□□□□ 0.36
TRIM13-208ENST00000478111 TMEM110Q86TL2 294 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 APCDD1Q8J025 514 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 ZNF606Q8WXB4 792 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 INTS2Q9H0H0 1204 aaKnown RBP17.29■□□□□ 0.36
TRIM13-208ENST00000478111 NEUROG2Q9H2A3 272 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 ACP6Q9NPH0 428 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 ADAMTS1Q9UHI8 967 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 CTNND2Q9UQB3 1225 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 NCKAP1Q9Y2A7 1128 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 GPSM3Q9Y4H4 160 aa17.29■□□□□ 0.36
TRIM13-208ENST00000478111 COL5A1P20908 1838 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 A0A1W2PP55 124 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 TARSL2A2RTX5 802 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 TYW5A2RUC4 315 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 AFPP02771 609 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 TACR2P21452 398 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 ACADSBP45954 432 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 STX17P56962 302 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 RACK1P63244 317 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 NUCB2P80303 420 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 CDH18Q13634 790 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 KCNJ12Q14500 433 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 TAF5Q15542 800 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 RAP1GAP2Q684P5 730 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 NCEH1Q6PIU2 408 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 MARCH9Q86YJ5 346 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 MMAAQ8IVH4 418 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 LGI2Q8N0V4 545 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 MDM1Q8TC05 714 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 PTPRN2Q92932 1015 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 SLC6A18Q96N87 628 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 PRMT1Q99873 361 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 SRRTQ9BXP5 876 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 CCDC86Q9H6F5 360 aaKnown RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 UBE2TQ9NPD8 197 aaPredicted RBP17.28■□□□□ 0.36
TRIM13-208ENST00000478111 TJP2Q9UDY2 1190 aa17.28■□□□□ 0.36
TRIM13-208ENST00000478111 E5RJQ4 531 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 BIN1O00499 593 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 WNT9AO14904 365 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 VILLO15195 856 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 RNASEH1O60930 286 aaKnown RBP17.27■□□□□ 0.36
TRIM13-208ENST00000478111 GNA14O95837 355 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 TRUB2O95900 331 aaKnown RBP17.27■□□□□ 0.36
TRIM13-208ENST00000478111 WNT1P04628 370 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 KRT5P13647 590 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 SLC8A1P32418 973 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 GRK6P43250 576 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 CCT8P50990 548 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 YWHAZP63104 245 aaKnown RBP17.27■□□□□ 0.36
TRIM13-208ENST00000478111 ECT2LQ008S8 904 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 AADATQ8N5Z0 425 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 GANCQ8TET4 914 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 RPL10LQ96L21 214 aaKnown RBP17.27■□□□□ 0.36
TRIM13-208ENST00000478111 POPDC2Q9HBU9 364 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 FZD4Q9ULV1 537 aa17.27■□□□□ 0.36
TRIM13-208ENST00000478111 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
TRIM13-208ENST00000478111 A0A1B0GTQ1 180 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 EDDM13A0A1B0GTR0 161 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 FAM47DPA6NHR8 397 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 GOLGA8CPA6NN73 597 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 CAPN9O14815 690 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 TNFSF14O43557 240 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 LETM1O95202 739 aaPredicted RBP17.26■□□□□ 0.35
TRIM13-208ENST00000478111 STK19P49842 368 aaPredicted RBP17.26■□□□□ 0.35
TRIM13-208ENST00000478111 IL9RQ01113 521 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 CAMK2BQ13554 666 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 PRAMEF14Q5SWL7 426 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 GJB7Q6PEY0 223 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 CHSY1Q86X52 802 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 STK40Q8N2I9 435 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 WDTC1Q8N5D0 677 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 OR2T34Q8NGX1 318 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 BTN2A3PQ96KV6 586 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 THAP9Q9H5L6 903 aa17.26■□□□□ 0.35
TRIM13-208ENST00000478111 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.26■□□□□ 0.35
TRIM13-208ENST00000478111 A0A1W2PR77 199 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 BECN2A8MW95 431 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 KCNU1A8MYU2 1149 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 GADD45BO75293 160 aaPredicted RBP17.25■□□□□ 0.35
TRIM13-208ENST00000478111 RNASEH2AO75792 299 aaKnown RBP17.25■□□□□ 0.35
TRIM13-208ENST00000478111 MOCS3O95396 460 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 APOEP02649 317 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 VAV1P15498 845 aa17.25■□□□□ 0.35
TRIM13-208ENST00000478111 MZF1P28698 734 aaPredicted RBP17.25■□□□□ 0.35
TRIM13-208ENST00000478111 SFSWAPQ12872 951 aaKnown RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms