RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 HEXIM2Q96MH2 286 aaKnown RBP20.99■□□□□ 0.95
APP-215ENST00000474136 NRSN2Q9GZP1 204 aa20.99■□□□□ 0.95
APP-215ENST00000474136 NIF3L1Q9GZT8 377 aa20.99■□□□□ 0.95
APP-215ENST00000474136 PABPC3Q9H361 631 aaKnown RBP20.99■□□□□ 0.95
APP-215ENST00000474136 SFMBT1Q9UHJ3 866 aa20.99■□□□□ 0.95
APP-215ENST00000474136 TRIM49P0CI25 452 aa20.98■□□□□ 0.95
APP-215ENST00000474136 TRIM49CP0CI26 452 aa20.98■□□□□ 0.95
APP-215ENST00000474136 CD70P32970 193 aa20.98■□□□□ 0.95
APP-215ENST00000474136 GCLMP48507 274 aa20.98■□□□□ 0.95
APP-215ENST00000474136 HARS2P49590 506 aaKnown RBP20.98■□□□□ 0.95
APP-215ENST00000474136 FANCCQ00597 558 aa20.98■□□□□ 0.95
APP-215ENST00000474136 PDE4CQ08493 712 aa20.98■□□□□ 0.95
APP-215ENST00000474136 RAB41Q5JT25 222 aa20.98■□□□□ 0.95
APP-215ENST00000474136 BHLHA9Q7RTU4 235 aa20.98■□□□□ 0.95
APP-215ENST00000474136 GPR155Q7Z3F1 870 aa20.98■□□□□ 0.95
APP-215ENST00000474136 AHI1Q8N157 1196 aa20.98■□□□□ 0.95
APP-215ENST00000474136 TSC1Q92574 1164 aa20.98■□□□□ 0.95
APP-215ENST00000474136 TUBGCP2Q9BSJ2 902 aa20.98■□□□□ 0.95
APP-215ENST00000474136 ULBP1Q9BZM6 244 aa20.98■□□□□ 0.95
APP-215ENST00000474136 IMPG2Q9BZV3 1241 aa20.98■□□□□ 0.95
APP-215ENST00000474136 RSPH9Q9H1X1 276 aaPredicted RBP20.98■□□□□ 0.95
APP-215ENST00000474136 AASDHPPTQ9NRN7 309 aa20.98■□□□□ 0.95
APP-215ENST00000474136 FBXL12Q9NXK8 326 aa20.98■□□□□ 0.95
APP-215ENST00000474136 NCKAP1Q9Y2A7 1128 aa20.98■□□□□ 0.95
APP-215ENST00000474136 MGAQ8IWI9 3026 aa20.97■□□□□ 0.95
APP-215ENST00000474136 COL5A1P20908 1838 aaPredicted RBP20.97■□□□□ 0.95
APP-215ENST00000474136 C1SP09871 688 aa20.97■□□□□ 0.95
APP-215ENST00000474136 ATP1A3P13637 1013 aa20.97■□□□□ 0.95
APP-215ENST00000474136 VAMP7P51809 220 aa20.97■□□□□ 0.95
APP-215ENST00000474136 TKTL1P51854 596 aa20.97■□□□□ 0.95
APP-215ENST00000474136 UBASH3AP57075 661 aa20.97■□□□□ 0.95
APP-215ENST00000474136 PPP3CAQ08209 521 aa20.97■□□□□ 0.95
APP-215ENST00000474136 MAN2A1Q16706 1144 aa20.97■□□□□ 0.95
APP-215ENST00000474136 BAP1Q92560 729 aa20.97■□□□□ 0.95
APP-215ENST00000474136 GOLGA1Q92805 767 aa20.97■□□□□ 0.95
APP-215ENST00000474136 EEF2KMTQ96G04 330 aa20.97■□□□□ 0.95
APP-215ENST00000474136 TRIM5Q9C035 493 aa20.97■□□□□ 0.95
APP-215ENST00000474136 NEUROG2Q9H2A3 272 aa20.97■□□□□ 0.95
APP-215ENST00000474136 SUN2Q9UH99 717 aa20.97■□□□□ 0.95
APP-215ENST00000474136 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.97■□□□□ 0.95
APP-215ENST00000474136 TENM4Q6N022 2769 aa20.97■□□□□ 0.95
APP-215ENST00000474136 PLXNA2O75051 1894 aa20.96■□□□□ 0.95
APP-215ENST00000474136 A0A1W2PP55 124 aa20.96■□□□□ 0.95
APP-215ENST00000474136 A0A1W2PR77 199 aa20.96■□□□□ 0.95
APP-215ENST00000474136 TULP2O00295 520 aa20.96■□□□□ 0.95
APP-215ENST00000474136 BRINP1O60477 761 aa20.96■□□□□ 0.95
APP-215ENST00000474136 STX10O60499 249 aa20.96■□□□□ 0.95
APP-215ENST00000474136 ATP5BP06576 529 aaKnown RBP20.96■□□□□ 0.95
APP-215ENST00000474136 MCCD1P59942 119 aaPredicted RBP20.96■□□□□ 0.95
APP-215ENST00000474136 CCDC173Q0VFZ6 552 aa20.96■□□□□ 0.95
APP-215ENST00000474136 BNIP3Q12983 259 aa20.96■□□□□ 0.95
APP-215ENST00000474136 KRT31Q15323 416 aa20.96■□□□□ 0.95
APP-215ENST00000474136 HSP90AA4PQ58FG1 418 aa20.96■□□□□ 0.95
APP-215ENST00000474136 USP30Q70CQ3 517 aa20.96■□□□□ 0.95
APP-215ENST00000474136 TRIM59Q8IWR1 403 aa20.96■□□□□ 0.95
APP-215ENST00000474136 EDEM1Q92611 657 aa20.96■□□□□ 0.95
APP-215ENST00000474136 FGF11Q92914 225 aa20.96■□□□□ 0.95
APP-215ENST00000474136 MYO19Q96H55 970 aa20.96■□□□□ 0.95
APP-215ENST00000474136 UBXN6Q9BZV1 441 aa20.96■□□□□ 0.95
APP-215ENST00000474136 MMRN2Q9H8L6 949 aa20.96■□□□□ 0.95
APP-215ENST00000474136 STOML2Q9UJZ1 356 aa20.96■□□□□ 0.95
APP-215ENST00000474136 TEX51A0A1B0GUA7 166 aa20.95■□□□□ 0.94
APP-215ENST00000474136 MID1O15344 667 aa20.95■□□□□ 0.94
APP-215ENST00000474136 MSI1O43347 362 aaKnown RBP20.95■□□□□ 0.94
APP-215ENST00000474136 SIN3BO75182 1162 aa20.95■□□□□ 0.94
APP-215ENST00000474136 ZBED1O96006 694 aa20.95■□□□□ 0.94
APP-215ENST00000474136 CDK4P11802 303 aa20.95■□□□□ 0.94
APP-215ENST00000474136 POLR2EP19388 210 aaKnown RBP20.95■□□□□ 0.94
APP-215ENST00000474136 CD38P28907 300 aa20.95■□□□□ 0.94
APP-215ENST00000474136 EPHA8P29322 1005 aaPredicted RBP20.95■□□□□ 0.94
APP-215ENST00000474136 CFHR1Q03591 330 aa20.95■□□□□ 0.94
APP-215ENST00000474136 TLE3Q04726 772 aa20.95■□□□□ 0.94
APP-215ENST00000474136 ADGRF1Q5T601 910 aa20.95■□□□□ 0.94
APP-215ENST00000474136 PM20D1Q6GTS8 502 aa20.95■□□□□ 0.94
APP-215ENST00000474136 RFWD3Q6PCD5 774 aa20.95■□□□□ 0.94
APP-215ENST00000474136 SLC4A11Q8NBS3 891 aa20.95■□□□□ 0.94
APP-215ENST00000474136 SKA1Q96BD8 255 aa20.95■□□□□ 0.94
APP-215ENST00000474136 GDF3Q9NR23 364 aa20.95■□□□□ 0.94
APP-215ENST00000474136 HBS1LQ9Y450 684 aaKnown RBP20.95■□□□□ 0.94
APP-215ENST00000474136 MAST4O15021 2626 aa20.94■□□□□ 0.94
APP-215ENST00000474136 GOLGA6L7A0A1B0GV03 622 aa20.94■□□□□ 0.94
APP-215ENST00000474136 CAPN9O14815 690 aa20.94■□□□□ 0.94
APP-215ENST00000474136 TBL1XO60907 577 aa20.94■□□□□ 0.94
APP-215ENST00000474136 COPB1P53618 953 aaKnown RBP20.94■□□□□ 0.94
APP-215ENST00000474136 CXADRP78310 365 aa20.94■□□□□ 0.94
APP-215ENST00000474136 SPACA3Q8IXA5 215 aa20.94■□□□□ 0.94
APP-215ENST00000474136 TMEM176AQ96HP8 235 aa20.94■□□□□ 0.94
APP-215ENST00000474136 OLA1Q9NTK5 396 aaKnown RBP20.94■□□□□ 0.94
APP-215ENST00000474136 A0A1B0GTH6 734 aa20.93■□□□□ 0.94
APP-215ENST00000474136 RNASEH2AO75792 299 aaKnown RBP20.93■□□□□ 0.94
APP-215ENST00000474136 RAD23BP54727 409 aa20.93■□□□□ 0.94
APP-215ENST00000474136 CST6Q15828 149 aa20.93■□□□□ 0.94
APP-215ENST00000474136 VWA3BQ502W6 1294 aa20.93■□□□□ 0.94
APP-215ENST00000474136 FKBP15Q5T1M5 1219 aa20.93■□□□□ 0.94
APP-215ENST00000474136 ERICH1Q86X53 443 aa20.93■□□□□ 0.94
APP-215ENST00000474136 MMAAQ8IVH4 418 aaKnown RBP20.93■□□□□ 0.94
APP-215ENST00000474136 ANKRD52Q8NB46 1076 aa20.93■□□□□ 0.94
APP-215ENST00000474136 OR2T34Q8NGX1 318 aa20.93■□□□□ 0.94
APP-215ENST00000474136 RNF139Q8WU17 664 aa20.93■□□□□ 0.94
APP-215ENST00000474136 LMLNQ96KR4 655 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms