RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PNPLA4P41247 253 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 NPTX2P47972 431 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 LIG4P49917 911 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ARPP19P56211 112 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 PEX3P56589 373 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 NTHL1P78549 312 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 SHC2P98077 582 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 TSPY1Q01534 308 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 TWF1Q12792 350 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 BFSP1Q12934 665 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 PAK1Q13153 545 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 GPR17Q13304 367 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 GPR19Q15760 415 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 NFE2Q16621 373 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 SLC5A9Q2M3M2 681 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ITPRIPL2Q3MIP1 535 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 PREPLQ4J6C6 727 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 RILPL1Q5EBL4 403 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ZC3H12BQ5HYM0 836 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 FAM78AQ5JUQ0 283 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 TTC38Q5R3I4 469 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ZFYVE27Q5T4F4 411 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 DAB2IPQ5VWQ8 1189 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 TANGO2Q6ICL3 276 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 CC2D1AQ6P1N0 951 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 VITQ6UXI7 678 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ALKAL1Q6UXT8 129 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 DSTYKQ6XUX3 929 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 DBX2Q6ZNG2 339 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 RABEPKQ7Z6M1 372 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 WDR5BQ86VZ2 330 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 JAZF1Q86VZ6 243 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 OSTM1Q86WC4 334 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 CDR2LQ86X02 465 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 THEM5Q8N1Q8 247 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 DCLK2Q8N568 766 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 KIAA1958Q8N8K9 716 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 IGSF22Q8N9C0 903 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 FSIP1Q8NA03 581 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 NSUN7Q8NE18 718 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 BEST2Q8NFU1 509 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 SPATA18Q8TC71 538 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 SPPL2BQ8TCT7 592 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 BPIFB1Q8TDL5 484 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 GAB3Q8WWW8 586 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 PSMG2Q969U7 264 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 AK8Q96MA6 479 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 CEP295NLQ96MC4 621 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 CDC6Q99741 560 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ACO2Q99798 780 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 CDT1Q9H211 546 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 LMAN1LQ9HAT1 526 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 VPS45Q9NRW7 570 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 KCND1Q9NSA2 647 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 DDX19AQ9NUU7 478 aaKnown RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 HCFC1R1Q9NWW0 138 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 UXTQ9UBK9 157 aaPredicted RBP3.77□□□□□ -1.81
XRN1-209ENST00000472625 ODF2LQ9ULJ1 636 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 SLC8A2Q9UPR5 921 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 COQ6Q9Y2Z9 468 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 C2CD2Q9Y426 696 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 YIPF1Q9Y548 306 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 CEP250Q9BV73 2442 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ACACBO00763 2458 aa3.77□□□□□ -1.81
XRN1-209ENST00000472625 ESYT3A0FGR9 886 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 CCDC66A2RUB6 948 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 SLC38A8A6NNN8 435 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 SPECC1L-ADORA2AF8WAN1 911 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 DDX3XO00571 662 aaKnown RBP eCLIP3.76□□□□□ -1.81
XRN1-209ENST00000472625 DVL2O14641 736 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 KCNK3O14649 394 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 ADAM12O43184 909 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 HIP1RO75146 1068 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 TBCAO75347 108 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 MED24O75448 989 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 EPN2O95208 641 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 ZNF806P0C7X5 589 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 CHRNB1P11230 501 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 HARSP12081 509 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 TRIM21P19474 475 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 CD72P21854 359 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 CCNE1P24864 410 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 HOXD12P35452 270 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 BRCC3P46736 316 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 AARSP49588 968 aaKnown RBP eCLIP3.76□□□□□ -1.81
XRN1-209ENST00000472625 SATB1Q01826 763 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 GUCY1A3Q02108 690 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 MCL1Q07820 350 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 BYSLQ13895 437 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 ZNF268Q14587 947 aaPredicted RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 PDGFRLQ15198 375 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 TEAD2Q15562 447 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 EARS2Q5JPH6 523 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 ARL6IP4Q66PJ3 421 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 SLFN12LQ6IEE8 588 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 PKN3Q6P5Z2 889 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 ARHGAP36Q6ZRI8 547 aa3.76□□□□□ -1.81
XRN1-209ENST00000472625 PTRH1Q86Y79 214 aaKnown RBP3.76□□□□□ -1.81
XRN1-209ENST00000472625 DCP1BQ8IZD4 617 aaKnown RBP3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms